RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 MCOLN1Q9GZU1 580 aa14.9□□□□□ -0.02
CDK7-208ENST00000512687 DENND2AQ9ULE3 1009 aa14.9□□□□□ -0.02
CDK7-208ENST00000512687 RPAP1Q9BWH6 1393 aaPredicted RBP14.89□□□□□ -0.03
CDK7-208ENST00000512687 SEMA3EO15041 775 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 IREB2P48200 963 aaKnown RBP14.89□□□□□ -0.03
CDK7-208ENST00000512687 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
CDK7-208ENST00000512687 SLC10A4Q96EP9 437 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 GNL3LQ9NVN8 582 aaKnown RBP14.89□□□□□ -0.03
CDK7-208ENST00000512687 ZSWIM8A7E2V4 1837 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
CDK7-208ENST00000512687 ZBTB7BO15156 539 aaPredicted RBP14.88□□□□□ -0.03
CDK7-208ENST00000512687 LDHBP07195 334 aaKnown RBP14.88□□□□□ -0.03
CDK7-208ENST00000512687 TNNI2P48788 182 aa14.88□□□□□ -0.03
CDK7-208ENST00000512687 DGKZQ13574 1117 aa14.88□□□□□ -0.03
CDK7-208ENST00000512687 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.88□□□□□ -0.03
CDK7-208ENST00000512687 SSH3Q8TE77 659 aa14.88□□□□□ -0.03
CDK7-208ENST00000512687 R3HDMLQ9H3Y0 253 aa14.88□□□□□ -0.03
CDK7-208ENST00000512687 AKAP2Q9Y2D5 859 aa14.88□□□□□ -0.03
CDK7-208ENST00000512687 PDS5AQ29RF7 1337 aaKnown RBP14.88□□□□□ -0.03
CDK7-208ENST00000512687 RFX7Q2KHR2 1363 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 UNCXA6NJT0 531 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 ZBTB48P10074 688 aaPredicted RBP14.87□□□□□ -0.03
CDK7-208ENST00000512687 ATP8B2P98198 1209 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 FKBP1CQ5VVH2 108 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 PI16Q6UXB8 463 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 FAM83AQ86UY5 434 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 ANKRD13AQ8IZ07 590 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDK7-208ENST00000512687 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 NEUROD6Q96NK8 337 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 ELP3Q9H9T3 547 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 TMOD2Q9NZR1 351 aa14.87□□□□□ -0.03
CDK7-208ENST00000512687 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDK7-208ENST00000512687 NFIAQ12857 509 aa14.86□□□□□ -0.03
CDK7-208ENST00000512687 G3BP1Q13283 466 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDK7-208ENST00000512687 VGLL4Q14135 290 aa14.86□□□□□ -0.03
CDK7-208ENST00000512687 MVPQ14764 893 aaKnown RBP14.86□□□□□ -0.03
CDK7-208ENST00000512687 ZNF384Q8TF68 577 aa14.86□□□□□ -0.03
CDK7-208ENST00000512687 OPTNQ96CV9 577 aa14.86□□□□□ -0.03
CDK7-208ENST00000512687 GAKO14976 1311 aa14.86□□□□□ -0.03
CDK7-208ENST00000512687 MANSC4A6NHS7 340 aaPredicted RBP14.85□□□□□ -0.03
CDK7-208ENST00000512687 ARID4AP29374 1257 aaPredicted RBP14.85□□□□□ -0.03
CDK7-208ENST00000512687 IFNL1Q8IU54 200 aa14.85□□□□□ -0.03
CDK7-208ENST00000512687 ZNF296Q8WUU4 475 aaPredicted RBP14.85□□□□□ -0.03
CDK7-208ENST00000512687 CFHR5Q9BXR6 569 aa14.85□□□□□ -0.03
CDK7-208ENST00000512687 HMG20BQ9P0W2 317 aa14.85□□□□□ -0.03
CDK7-208ENST00000512687 FAM198AQ9UFP1 575 aa14.85□□□□□ -0.03
CDK7-208ENST00000512687 ABCF2Q9UG63 623 aa14.85□□□□□ -0.03
CDK7-208ENST00000512687 MCAMP43121 646 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 TCP10Q12799 353 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 ZFPM1Q8IX07 1006 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 FAM151AQ8WW52 585 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 MYH1P12882 1939 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
CDK7-208ENST00000512687 CCDC85CA6NKD9 419 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 GPR25O00155 361 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 CEP85Q6P2H3 762 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 DZIP1Q86YF9 867 aaKnown RBP14.83□□□□□ -0.04
CDK7-208ENST00000512687 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.04
CDK7-208ENST00000512687 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 WRNIP1Q96S55 665 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 PTPN18Q99952 460 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 DBNDD2Q9BQY9 259 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 USP40Q9NVE5 1235 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 MROH7-TTC4A0A0A0MT08 1334 aa14.83□□□□□ -0.04
CDK7-208ENST00000512687 MYH7P12883 1935 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 TESPA1A2RU30 521 aaPredicted RBP14.82□□□□□ -0.04
CDK7-208ENST00000512687 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
CDK7-208ENST00000512687 MECOMQ03112 1051 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 TBC1D9Q6ZT07 1266 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
CDK7-208ENST00000512687 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
CDK7-208ENST00000512687 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 NOP58Q9Y2X3 529 aaKnown RBP14.82□□□□□ -0.04
CDK7-208ENST00000512687 MGAMO43451 1857 aa14.82□□□□□ -0.04
CDK7-208ENST00000512687 INPP5BP32019 993 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 BTDP43251 543 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 INHBEP58166 350 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
CDK7-208ENST00000512687 NOM1Q5C9Z4 860 aaKnown RBP14.81□□□□□ -0.04
CDK7-208ENST00000512687 GORABQ5T7V8 394 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 SH3BP5LQ7L8J4 393 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 BRI3BPQ8WY22 251 aa14.81□□□□□ -0.04
CDK7-208ENST00000512687 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
CDK7-208ENST00000512687 DDX4Q9NQI0 724 aaKnown RBP14.81□□□□□ -0.04
CDK7-208ENST00000512687 TLR7Q9NYK1 1049 aaKnown RBP14.81□□□□□ -0.04
CDK7-208ENST00000512687 CSADQ9Y600 493 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms