RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 URI1O94763 535 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-207ENST00000512462 TOP1P11387 765 aaKnown RBP13.74□□□□□ -0.21
PRDM16-207ENST00000512462 DNA2P51530 1060 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 ZNF174Q15697 407 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 SOGA3Q5TF21 947 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 KRT40Q6A162 431 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
PRDM16-207ENST00000512462 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 NWD1Q149M9 1564 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 BAZ2BQ9UIF8 2168 aaKnown RBP13.74□□□□□ -0.21
PRDM16-207ENST00000512462 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 WASF1Q92558 559 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-207ENST00000512462 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
PRDM16-207ENST00000512462 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 PDE8BO95263 885 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 MCAMP43121 646 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 STOX1Q6ZVD7 989 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 HEATR3Q7Z4Q2 680 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 DIS3L2Q8IYB7 885 aaKnown RBP13.73□□□□□ -0.21
PRDM16-207ENST00000512462 TRMT44Q8IYL2 757 aaKnown RBP13.73□□□□□ -0.21
PRDM16-207ENST00000512462 LPIN2Q92539 896 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 FAM170AA1A519 330 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 MCM7P33993 719 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 TTC14Q96N46 770 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
PRDM16-207ENST00000512462 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-207ENST00000512462 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-207ENST00000512462 UBASH3AP57075 661 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 TTLL11Q8NHH1 800 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 PXDNQ92626 1479 aa13.73□□□□□ -0.21
PRDM16-207ENST00000512462 BTBD18B2RXH4 712 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 H7C1W4 665 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 IDEP14735 1019 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 MTX1Q13505 466 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 NSUN7Q8NE18 718 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 KAT14Q9H8E8 782 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 USP17L21D6R901 530 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 KRT18P05783 430 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 FILIP1LQ4L180 1135 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 SUSD4Q5VX71 490 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 ANO1Q5XXA6 986 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 PDCL2Q8N4E4 241 aa13.72□□□□□ -0.21
PRDM16-207ENST00000512462 CCDC47Q96A33 483 aaKnown RBP13.72□□□□□ -0.21
PRDM16-207ENST00000512462 CHRNDQ07001 517 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 KRT23Q9C075 422 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 LRRC37A3O60309 1634 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 SMTNL1A8MU46 457 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 CTAGE5O15320 804 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 OFD1O75665 1012 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 SMARCE1Q969G3 411 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
PRDM16-207ENST00000512462 CLSTN2Q9H4D0 955 aa13.71□□□□□ -0.21
PRDM16-207ENST00000512462 POLR2DO15514 142 aaKnown RBP13.71□□□□□ -0.22
PRDM16-207ENST00000512462 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.22
PRDM16-207ENST00000512462 CRACR2BQ8N4Y2 399 aaPredicted RBP13.71□□□□□ -0.22
PRDM16-207ENST00000512462 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 ZNF202O95125 648 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 GOLGA8FQ08AF8 430 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 GOLGA8DPQ0D2H9 430 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 NDUFA8P51970 172 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 FOXO4P98177 505 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 PNOCQ13519 176 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 MYSM1Q5VVJ2 828 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 LTN1O94822 1766 aa13.7□□□□□ -0.22
PRDM16-207ENST00000512462 PDE4BQ07343 736 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 TOM1O60784 492 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 RASGRF1Q13972 1273 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 MAPKAPK5Q8IW41 473 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 NFAT5O94916 1531 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 PFKFB2O60825 505 aa13.69□□□□□ -0.22
PRDM16-207ENST00000512462 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
PRDM16-207ENST00000512462 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
PRDM16-207ENST00000512462 ARID5BQ14865 1188 aa13.68□□□□□ -0.22
PRDM16-207ENST00000512462 C11orf57Q6ZUT1 292 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms