RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
DDX41-214ENST00000512334 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
DDX41-214ENST00000512334 CYP2E1P05181 493 aaPredicted RBP19.44■□□□□ 0.7
DDX41-214ENST00000512334 GSTO1P78417 241 aa19.44■□□□□ 0.7
DDX41-214ENST00000512334 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
DDX41-214ENST00000512334 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
DDX41-214ENST00000512334 MROH7-TTC4A0A0A0MT08 1334 aa19.44■□□□□ 0.7
DDX41-214ENST00000512334 GAKO14976 1311 aa19.44■□□□□ 0.7
DDX41-214ENST00000512334 SSC5DA1L4H1 1573 aa19.44■□□□□ 0.7
DDX41-214ENST00000512334 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
DDX41-214ENST00000512334 LDHCP07864 332 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 MAP2K2P36507 400 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 BTDP43251 543 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
DDX41-214ENST00000512334 NOGQ13253 232 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 FAM83AQ86UY5 434 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 CDAN1Q8IWY9 1227 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 AIDAQ96BJ3 306 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 NSUN4Q96CB9 384 aaKnown RBP19.43■□□□□ 0.7
DDX41-214ENST00000512334 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
DDX41-214ENST00000512334 NDUFB9Q9Y6M9 179 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 PCNTO95613 3336 aa19.43■□□□□ 0.7
DDX41-214ENST00000512334 TCP10Q12799 353 aa19.42■□□□□ 0.7
DDX41-214ENST00000512334 FAM163AQ96GL9 167 aaPredicted RBP19.42■□□□□ 0.7
DDX41-214ENST00000512334 TEPSINQ96N21 525 aa19.42■□□□□ 0.7
DDX41-214ENST00000512334 DCTPP1Q9H773 170 aa19.42■□□□□ 0.7
DDX41-214ENST00000512334 THSD7BQ9C0I4 1608 aa19.42■□□□□ 0.7
DDX41-214ENST00000512334 FAM155AB1AL88 458 aaPredicted RBP19.41■□□□□ 0.7
DDX41-214ENST00000512334 SLC10A3P09131 477 aa19.41■□□□□ 0.7
DDX41-214ENST00000512334 IREB2P48200 963 aaKnown RBP19.41■□□□□ 0.7
DDX41-214ENST00000512334 NFIAQ12857 509 aa19.41■□□□□ 0.7
DDX41-214ENST00000512334 NAA16Q6N069 864 aaPredicted RBP19.41■□□□□ 0.7
DDX41-214ENST00000512334 RASAL3Q86YV0 1011 aa19.41■□□□□ 0.7
DDX41-214ENST00000512334 ZNF384Q8TF68 577 aa19.41■□□□□ 0.7
DDX41-214ENST00000512334 NOL10Q9BSC4 688 aaKnown RBP19.41■□□□□ 0.7
DDX41-214ENST00000512334 BEGAINQ9BUH8 593 aa19.41■□□□□ 0.7
DDX41-214ENST00000512334 PIH1D3Q9NQM4 214 aaKnown RBP19.41■□□□□ 0.7
DDX41-214ENST00000512334 IDH1O75874 414 aaKnown RBP19.4■□□□□ 0.7
DDX41-214ENST00000512334 FAM151AQ8WW52 585 aa19.4■□□□□ 0.7
DDX41-214ENST00000512334 WBP1LQ9NX94 342 aa19.4■□□□□ 0.7
DDX41-214ENST00000512334 MAST2Q6P0Q8 1798 aa19.39■□□□□ 0.7
DDX41-214ENST00000512334 AK9Q5TCS8 1911 aa19.39■□□□□ 0.7
DDX41-214ENST00000512334 GPR75-ASB3A0A0A6YYF3 556 aa19.39■□□□□ 0.69
DDX41-214ENST00000512334 USP2O75604 605 aaPredicted RBP19.39■□□□□ 0.69
DDX41-214ENST00000512334 MAP3K11Q16584 847 aa19.39■□□□□ 0.69
DDX41-214ENST00000512334 LDLRAD1Q5T700 205 aa19.39■□□□□ 0.69
DDX41-214ENST00000512334 ZIC5Q96T25 663 aa19.39■□□□□ 0.69
DDX41-214ENST00000512334 DNAJC2Q99543 621 aaKnown RBP19.39■□□□□ 0.69
DDX41-214ENST00000512334 FAM198AQ9UFP1 575 aa19.39■□□□□ 0.69
DDX41-214ENST00000512334 MYO5AQ9Y4I1 1855 aaKnown RBP19.39■□□□□ 0.69
DDX41-214ENST00000512334 RGS3P49796 1198 aa19.38■□□□□ 0.69
DDX41-214ENST00000512334 KIF23Q02241 960 aaPredicted RBP19.38■□□□□ 0.69
DDX41-214ENST00000512334 MKRN3Q13064 507 aaKnown RBP19.38■□□□□ 0.69
DDX41-214ENST00000512334 PICALMQ13492 652 aa19.38■□□□□ 0.69
DDX41-214ENST00000512334 HOOK2Q96ED9 719 aa19.38■□□□□ 0.69
DDX41-214ENST00000512334 SLC10A4Q96EP9 437 aa19.38■□□□□ 0.69
DDX41-214ENST00000512334 RPAP1Q9BWH6 1393 aaPredicted RBP19.38■□□□□ 0.69
DDX41-214ENST00000512334 ANTXR1Q9H6X2 564 aa19.38■□□□□ 0.69
DDX41-214ENST00000512334 FOXN1O15353 648 aa19.37■□□□□ 0.69
DDX41-214ENST00000512334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.37■□□□□ 0.69
DDX41-214ENST00000512334 IDI2Q9BXS1 227 aa19.37■□□□□ 0.69
DDX41-214ENST00000512334 BAG3O95817 575 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 CYP7A1P22680 504 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 AAMPQ13685 434 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 TTF1Q15361 905 aaPredicted RBP19.36■□□□□ 0.69
DDX41-214ENST00000512334 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 ZSCAN29Q8IWY8 852 aaPredicted RBP19.36■□□□□ 0.69
DDX41-214ENST00000512334 ZFPM1Q8IX07 1006 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 ANKRD13AQ8IZ07 590 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 EXOC6Q8TAG9 804 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 CLMNQ96JQ2 1002 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
DDX41-214ENST00000512334 AATFQ9NY61 560 aaKnown RBP eCLIP19.36■□□□□ 0.69
DDX41-214ENST00000512334 GOLIM4O00461 696 aa19.35■□□□□ 0.69
DDX41-214ENST00000512334 IGSF3O75054 1194 aa19.35■□□□□ 0.69
DDX41-214ENST00000512334 ENTPD3O75355 529 aa19.35■□□□□ 0.69
DDX41-214ENST00000512334 WDHD1O75717 1129 aaPredicted RBP19.35■□□□□ 0.69
DDX41-214ENST00000512334 RHBDL3P58872 404 aa19.35■□□□□ 0.69
DDX41-214ENST00000512334 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
DDX41-214ENST00000512334 DDX4Q9NQI0 724 aaKnown RBP19.35■□□□□ 0.69
DDX41-214ENST00000512334 ZBTB47Q9UFB7 747 aaPredicted RBP19.35■□□□□ 0.69
DDX41-214ENST00000512334 RFX7Q2KHR2 1363 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 UNCXA6NJT0 531 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 MAP4K4O95819 1239 aaPredicted RBP19.34■□□□□ 0.69
DDX41-214ENST00000512334 PLCG2P16885 1265 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 ATP5JP18859 108 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 CTCFP49711 727 aaPredicted RBP19.34■□□□□ 0.69
DDX41-214ENST00000512334 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 TEX11Q8IYF3 940 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 SH3RF3Q8TEJ3 882 aaPredicted RBP19.34■□□□□ 0.69
DDX41-214ENST00000512334 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
DDX41-214ENST00000512334 OTOFQ9HC10 1997 aa19.33■□□□□ 0.69
DDX41-214ENST00000512334 MAP3K9P80192 1104 aa19.33■□□□□ 0.68
DDX41-214ENST00000512334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.33■□□□□ 0.68
DDX41-214ENST00000512334 EDC3Q96F86 508 aaKnown RBP19.33■□□□□ 0.68
DDX41-214ENST00000512334 WRNIP1Q96S55 665 aa19.33■□□□□ 0.68
DDX41-214ENST00000512334 CSRNP1Q96S65 589 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms