RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
PDGFRA-209ENST00000512143 AATFQ9NY61 560 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDGFRA-209ENST00000512143 TTF2Q9UNY4 1162 aaKnown RBP11.93□□□□□ -0.5
PDGFRA-209ENST00000512143 TAF6LQ9Y6J9 622 aa11.93□□□□□ -0.5
PDGFRA-209ENST00000512143 SBF1O95248 1867 aa11.93□□□□□ -0.5
PDGFRA-209ENST00000512143 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 RAD17O75943 681 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 RABEP1Q15276 862 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 CTNNA3Q9UI47 895 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 DAGLAQ9Y4D2 1042 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
PDGFRA-209ENST00000512143 BAG3O95817 575 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 BTDP43251 543 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 CRKP46108 304 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 ZDHHC15Q96MV8 337 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
PDGFRA-209ENST00000512143 F8W031 263 aaPredicted RBP11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 LMNB1P20700 586 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 ANP32AP39687 249 aaKnown RBP11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 STOX1Q6ZVD7 989 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 SDR42E1Q8WUS8 393 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 SNX21Q969T3 373 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 DCP1AQ9NPI6 582 aaPredicted RBP11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 ATP8A2Q9NTI2 1148 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
PDGFRA-209ENST00000512143 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 APPP05067 770 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 PLCG2P16885 1265 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 MMP14P50281 582 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 SCNN1DP51172 638 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 COL9A3Q14050 684 aaPredicted RBP11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 KRT32Q14532 448 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 TNIP1Q15025 636 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 SBK1Q52WX2 424 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 NACAP1Q9BZK3 213 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 NAPBQ9H115 298 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 ANAPC4Q9UJX5 808 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
PDGFRA-209ENST00000512143 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 BAZ2AQ9UIF9 1905 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 ZNF213O14771 459 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 CDC42EP5Q6NZY7 148 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 CNKSR2Q8WXI2 1034 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 ZBED3Q96IU2 234 aaPredicted RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 TTC14Q96N46 770 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 NOL10Q9BSC4 688 aaKnown RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 TACC3Q9Y6A5 838 aa11.88□□□□□ -0.51
PDGFRA-209ENST00000512143 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 E7EWF7 191 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 NPM3O75607 178 aaKnown RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 FGRP09769 529 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 USP17L8P0C7I0 530 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 PSMA5P28066 241 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 TDO2P48775 406 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 NEK4P51957 841 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 HAND2P61296 217 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 RUFY3Q7L099 469 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 DPF2Q92785 391 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 UPF3BQ9BZI7 483 aaKnown RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
PDGFRA-209ENST00000512143 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 USP17L12C9JPN9 530 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 USP17L21D6R901 530 aa11.86□□□□□ -0.51
PDGFRA-209ENST00000512143 EIF6P56537 245 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms