RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
NPHP3-210ENST00000512094 FARP2O94887 1054 aaPredicted RBP9.54□□□□□ -0.88
NPHP3-210ENST00000512094 FUT4P22083 530 aa9.54□□□□□ -0.88
NPHP3-210ENST00000512094 NETO1Q8TDF5 533 aa9.54□□□□□ -0.88
NPHP3-210ENST00000512094 FAM168AQ92567 244 aa9.54□□□□□ -0.88
NPHP3-210ENST00000512094 PPP1R9AQ9ULJ8 1098 aa9.54□□□□□ -0.88
NPHP3-210ENST00000512094 FAM87AP0C7U9 286 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 CD8BP10966 210 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 CDK5R2Q13319 367 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
NPHP3-210ENST00000512094 PKN1Q16512 942 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 FAM181AQ8N9Y4 354 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 GLIS3Q8NEA6 775 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 ZNF576Q9H609 170 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
NPHP3-210ENST00000512094 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
NPHP3-210ENST00000512094 TMPRSS2O15393 492 aa9.51□□□□□ -0.89
NPHP3-210ENST00000512094 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
NPHP3-210ENST00000512094 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPHP3-210ENST00000512094 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
NPHP3-210ENST00000512094 MBNL3Q9NUK0 354 aaKnown RBP9.51□□□□□ -0.89
NPHP3-210ENST00000512094 ADAMTS6Q9UKP5 1117 aa9.51□□□□□ -0.89
NPHP3-210ENST00000512094 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
NPHP3-210ENST00000512094 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
NPHP3-210ENST00000512094 AP3B2Q13367 1082 aa9.5□□□□□ -0.89
NPHP3-210ENST00000512094 FBLN7Q53RD9 439 aa9.5□□□□□ -0.89
NPHP3-210ENST00000512094 SPOCD1Q6ZMY3 1216 aa9.5□□□□□ -0.89
NPHP3-210ENST00000512094 ABL1P00519 1130 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 ITPKAP23677 461 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 CD96P40200 585 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 KIAA0319Q5VV43 1072 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 KSR1Q8IVT5 923 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 LRRN4CLQ8ND94 238 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 ANO2Q9NQ90 1003 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 VAV3Q9UKW4 847 aa9.49□□□□□ -0.89
NPHP3-210ENST00000512094 LIG1P18858 919 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 PRKCQQ04759 706 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 ZNF211Q13398 564 aaPredicted RBP9.48□□□□□ -0.89
NPHP3-210ENST00000512094 PI4K2BQ8TCG2 481 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 TMEM40Q8WWA1 233 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 EHD4Q9H223 541 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 U3KQE9 123 aa9.48□□□□□ -0.89
NPHP3-210ENST00000512094 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
NPHP3-210ENST00000512094 ATXN3LQ9H3M9 355 aa9.47□□□□□ -0.89
NPHP3-210ENST00000512094 ID3Q02535 119 aa9.46□□□□□ -0.9
NPHP3-210ENST00000512094 FANCD2OSQ96PS1 177 aa9.46□□□□□ -0.9
NPHP3-210ENST00000512094 KRTAP4-2Q9BYR5 136 aa9.46□□□□□ -0.9
NPHP3-210ENST00000512094 CCDC86Q9H6F5 360 aaKnown RBP9.46□□□□□ -0.9
NPHP3-210ENST00000512094 IFI16Q16666 785 aaKnown RBP9.45□□□□□ -0.9
NPHP3-210ENST00000512094 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
NPHP3-210ENST00000512094 SMYD4Q8IYR2 804 aaPredicted RBP9.45□□□□□ -0.9
NPHP3-210ENST00000512094 HRASLS5Q96KN8 279 aa9.45□□□□□ -0.9
NPHP3-210ENST00000512094 SLC38A3Q99624 504 aa9.45□□□□□ -0.9
NPHP3-210ENST00000512094 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
NPHP3-210ENST00000512094 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
NPHP3-210ENST00000512094 CEACAM5P06731 702 aa9.44□□□□□ -0.9
NPHP3-210ENST00000512094 AOC3Q16853 763 aa9.44□□□□□ -0.9
NPHP3-210ENST00000512094 LEFTY1O75610 366 aa9.43□□□□□ -0.9
NPHP3-210ENST00000512094 NEFLP07196 543 aa9.43□□□□□ -0.9
NPHP3-210ENST00000512094 SLFN14P0C7P3 912 aa9.43□□□□□ -0.9
NPHP3-210ENST00000512094 PTPN12Q05209 780 aaKnown RBP9.43□□□□□ -0.9
NPHP3-210ENST00000512094 MKNK2Q9HBH9 465 aa9.43□□□□□ -0.9
NPHP3-210ENST00000512094 ZNF862O60290 1169 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 OXCT1P55809 520 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
NPHP3-210ENST00000512094 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
NPHP3-210ENST00000512094 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
NPHP3-210ENST00000512094 ZNF157P51786 506 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-210ENST00000512094 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
NPHP3-210ENST00000512094 BRPF3Q9ULD4 1205 aa9.41□□□□□ -0.9
NPHP3-210ENST00000512094 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
NPHP3-210ENST00000512094 CPNE3O75131 537 aaKnown RBP9.4□□□□□ -0.9
NPHP3-210ENST00000512094 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
NPHP3-210ENST00000512094 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPHP3-210ENST00000512094 ORC1Q13415 861 aa9.4□□□□□ -0.9
NPHP3-210ENST00000512094 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
NPHP3-210ENST00000512094 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
NPHP3-210ENST00000512094 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
NPHP3-210ENST00000512094 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
NPHP3-210ENST00000512094 ITIH2P19823 946 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 FAAP100Q0VG06 881 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 MESP2Q0VG99 397 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
NPHP3-210ENST00000512094 SLC23A3Q6PIS1 610 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 FLAD1Q8NFF5 587 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 FAM84AQ96KN4 292 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 PCOLCE2Q9UKZ9 415 aa9.39□□□□□ -0.91
NPHP3-210ENST00000512094 LRRC10BA6NIK2 292 aa9.38□□□□□ -0.91
NPHP3-210ENST00000512094 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
NPHP3-210ENST00000512094 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
NPHP3-210ENST00000512094 KRT82Q9NSB4 513 aa9.38□□□□□ -0.91
NPHP3-210ENST00000512094 ZSWIM9Q86XI8 627 aa9.37□□□□□ -0.91
NPHP3-210ENST00000512094 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.37□□□□□ -0.91
NPHP3-210ENST00000512094 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
NPHP3-210ENST00000512094 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms