RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CCDC94Q9BW85 323 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-209ENST00000512055 TTC12Q9H892 705 aaPredicted RBP12.29□□□□□ -0.44
CPNE4-209ENST00000512055 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 CPS1P31327 1500 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 MACROD2A1Z1Q3 448 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 TOM1O60784 492 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 MBD4O95243 580 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 PSMD1Q99460 953 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 KRT23Q9C075 422 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 ADCK5Q3MIX3 580 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 MYO3AQ8NEV4 1616 aa12.29□□□□□ -0.44
CPNE4-209ENST00000512055 GPAA1O43292 621 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 RTN1Q16799 776 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 CERS3Q8IU89 383 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 B4E1Z4 1266 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 TYRO3Q06418 890 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 CDC37L1Q7L3B6 337 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 FAM200AQ8TCP9 573 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 TMEM63CQ9P1W3 806 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 DBNLQ9UJU6 430 aaKnown RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 CETN2P41208 172 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 RPAINQ86UA6 219 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 LMNTD2Q8IXW0 634 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 LMTK3Q96Q04 1460 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 HSF2BPO75031 334 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 CEP128Q6ZU80 1094 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 SMAP1Q8IYB5 467 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 ESR2Q92731 530 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 VAT1LQ9HCJ6 419 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 STX8Q9UNK0 236 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 PDE8AO60658 829 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 TACC1O75410 805 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 MATR3P43243 847 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 SYKP43405 635 aa12.28□□□□□ -0.44
CPNE4-209ENST00000512055 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE4-209ENST00000512055 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 PPP1R14CQ8TAE6 165 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 ZNF287Q9HBT7 754 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 ARFGAP3Q9NP61 516 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 RABGAP1Q9Y3P9 1069 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 MROH2AA6NES4 1674 aa12.27□□□□□ -0.44
CPNE4-209ENST00000512055 CLCN1P35523 988 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 PDE4BQ07343 736 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 DBN1Q16643 649 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 ANKS4BQ8N8V4 417 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 APPBP2Q92624 585 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 MAGEB6P1A0A0J9YX57 407 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 WHAMMP3Q1A5X7 153 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 DNAJC21Q5F1R6 531 aaKnown RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 IFIT1BQ5T764 474 aaKnown RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 ANAPC4Q9UJX5 808 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 SEC63Q9UGP8 760 aaKnown RBP12.27□□□□□ -0.45
CPNE4-209ENST00000512055 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
CPNE4-209ENST00000512055 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 SPTLC2O15270 562 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 PEX19P40855 299 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 SPTY2D1Q68D10 685 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 PIK3R5Q8WYR1 880 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 SEPT8Q92599 483 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 NAA15Q9BXJ9 866 aaKnown RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 ZC3H13Q5T200 1668 aaKnown RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CASQ2O14958 399 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 PSMC4P43686 418 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 TMC6Q7Z403 805 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CTAGE6Q86UF2 777 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-209ENST00000512055 TM6SF1Q9BZW5 370 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 SSH2Q76I76 1423 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 ZBTB17Q13105 803 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
CPNE4-209ENST00000512055 CYP27B1O15528 508 aa12.25□□□□□ -0.45
CPNE4-209ENST00000512055 TOP1P11387 765 aaKnown RBP12.25□□□□□ -0.45
CPNE4-209ENST00000512055 SNW1Q13573 536 aaKnown RBP12.25□□□□□ -0.45
CPNE4-209ENST00000512055 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
CPNE4-209ENST00000512055 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms