RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
DDX41-213ENST00000512027 TNS4Q8IZW8 715 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 ZGPATQ8N5A5 531 aaKnown RBP20.29■□□□□ 0.84
DDX41-213ENST00000512027 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 EAF2Q96CJ1 260 aaPredicted RBP20.29■□□□□ 0.84
DDX41-213ENST00000512027 PRDM10Q9NQV6 1147 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
DDX41-213ENST00000512027 MAST2Q6P0Q8 1798 aa20.29■□□□□ 0.84
DDX41-213ENST00000512027 APBB1O00213 710 aa20.28■□□□□ 0.84
DDX41-213ENST00000512027 TTC39AQ5SRH9 613 aa20.28■□□□□ 0.84
DDX41-213ENST00000512027 LAMB1P07942 1786 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 MECOMQ03112 1051 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 TCP10Q12799 353 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 PDE3AQ14432 1141 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
DDX41-213ENST00000512027 BCL11AQ9H165 835 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
DDX41-213ENST00000512027 GAKO14976 1311 aa20.27■□□□□ 0.83
DDX41-213ENST00000512027 TRPA1O75762 1119 aa20.26■□□□□ 0.83
DDX41-213ENST00000512027 UQCRFS1P1P0C7P4 283 aa20.26■□□□□ 0.83
DDX41-213ENST00000512027 IREB2P48200 963 aaKnown RBP20.26■□□□□ 0.83
DDX41-213ENST00000512027 SPRYD7Q5W111 196 aa20.26■□□□□ 0.83
DDX41-213ENST00000512027 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
DDX41-213ENST00000512027 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
DDX41-213ENST00000512027 BTDP43251 543 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 IFFO2Q5TF58 517 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 FKBP1CQ5VVH2 108 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
DDX41-213ENST00000512027 FAM83AQ86UY5 434 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 ZFPM1Q8IX07 1006 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 RPAP2Q8IXW5 612 aaPredicted RBP20.25■□□□□ 0.83
DDX41-213ENST00000512027 SLC10A4Q96EP9 437 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 RAI14Q9P0K7 980 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 FAM198AQ9UFP1 575 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
DDX41-213ENST00000512027 RPAP1Q9BWH6 1393 aaPredicted RBP20.24■□□□□ 0.83
DDX41-213ENST00000512027 CA12O43570 354 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 GJA5P36382 358 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 AACSQ86V21 672 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 RHPN1Q8TCX5 695 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 WNK4Q96J92 1243 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 NDUFB9Q9Y6M9 179 aa20.24■□□□□ 0.83
DDX41-213ENST00000512027 RFX7Q2KHR2 1363 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 ZAP70P43403 619 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.23■□□□□ 0.83
DDX41-213ENST00000512027 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
DDX41-213ENST00000512027 NSUN4Q96CB9 384 aaKnown RBP20.23■□□□□ 0.83
DDX41-213ENST00000512027 HMMRO75330 724 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 CYP2E1P05181 493 aaPredicted RBP20.22■□□□□ 0.83
DDX41-213ENST00000512027 RGS3P49796 1198 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 VGLL4Q14135 290 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 MIGA2Q7L4E1 593 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDX41-213ENST00000512027 LRP2BPQ9P2M1 347 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
DDX41-213ENST00000512027 PICALMQ13492 652 aa20.21■□□□□ 0.83
DDX41-213ENST00000512027 DDX4Q9NQI0 724 aaKnown RBP20.21■□□□□ 0.83
DDX41-213ENST00000512027 PIH1D3Q9NQM4 214 aaKnown RBP20.21■□□□□ 0.83
DDX41-213ENST00000512027 SAGE1Q9NXZ1 904 aa20.21■□□□□ 0.83
DDX41-213ENST00000512027 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
DDX41-213ENST00000512027 CAPN15O75808 1086 aa20.2■□□□□ 0.82
DDX41-213ENST00000512027 SLURP2P0DP57 97 aa20.2■□□□□ 0.82
DDX41-213ENST00000512027 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
DDX41-213ENST00000512027 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
DDX41-213ENST00000512027 SLF2Q8IX21 1173 aa20.2■□□□□ 0.82
DDX41-213ENST00000512027 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
DDX41-213ENST00000512027 FAM163AQ96GL9 167 aaPredicted RBP20.2■□□□□ 0.82
DDX41-213ENST00000512027 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
DDX41-213ENST00000512027 CHMP4BQ9H444 224 aaKnown RBP20.2■□□□□ 0.82
DDX41-213ENST00000512027 GPR75-ASB3A0A0A6YYF3 556 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 TM4SF4P48230 202 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 RHBDL3P58872 404 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 MAP3K9P80192 1104 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 SH3BP5LQ7L8J4 393 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 OPTNQ96CV9 577 aa20.19■□□□□ 0.82
DDX41-213ENST00000512027 ZNF512BQ96KM6 892 aaPredicted RBP20.19■□□□□ 0.82
DDX41-213ENST00000512027 TBC1D8O95759 1140 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 ZBTB48P10074 688 aaPredicted RBP20.18■□□□□ 0.82
DDX41-213ENST00000512027 INPP5BP32019 993 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 GSTO1P78417 241 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 SREBF2Q12772 1141 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 ADGRA1Q86SQ6 560 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 REM2Q8IYK8 340 aaPredicted RBP20.18■□□□□ 0.82
DDX41-213ENST00000512027 KIF1BPQ96EK5 621 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 IDI2Q9BXS1 227 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 ANTXR1Q9H6X2 564 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 SNCAIPQ9Y6H5 919 aa20.18■□□□□ 0.82
DDX41-213ENST00000512027 DDTLA6NHG4 134 aaPredicted RBP20.17■□□□□ 0.82
DDX41-213ENST00000512027 UNCXA6NJT0 531 aa20.17■□□□□ 0.82
DDX41-213ENST00000512027 NAA16Q6N069 864 aaPredicted RBP20.17■□□□□ 0.82
DDX41-213ENST00000512027 OTUD5Q96G74 571 aa20.17■□□□□ 0.82
DDX41-213ENST00000512027 CSADQ9Y600 493 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms