RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 ANXA1P04083 346 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 KRT24Q2M2I5 525 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 STYK1Q6J9G0 422 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 TBC1D9Q6ZT07 1266 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 JMYQ8N9B5 988 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 KLRG1Q96E93 195 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
RAB28-207ENST00000511649 TEX13AQ9BXU3 409 aaPredicted RBP8.54□□□□□ -1.04
RAB28-207ENST00000511649 STK17AQ9UEE5 414 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
RAB28-207ENST00000511649 DUOX1Q9NRD9 1551 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 SCN4AP35499 1836 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 HTATSF1O43719 755 aaKnown RBP8.53□□□□□ -1.04
RAB28-207ENST00000511649 ATP9BO43861 1147 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
RAB28-207ENST00000511649 PDE6BP35913 854 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 FSTL1Q12841 308 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 NCOA4Q13772 614 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
RAB28-207ENST00000511649 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 EML3Q32P44 896 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 NBPF5PQ86XG9 351 aaPredicted RBP8.53□□□□□ -1.04
RAB28-207ENST00000511649 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
RAB28-207ENST00000511649 NIP7Q9Y221 180 aaKnown RBP eCLIP8.53□□□□□ -1.04
RAB28-207ENST00000511649 DDX60Q8IY21 1712 aaKnown RBP8.53□□□□□ -1.04
RAB28-207ENST00000511649 SOBPA7XYQ1 873 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 LZTS3O60299 673 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 MASTLQ96GX5 879 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 ZNF277Q9NRM2 450 aaPredicted RBP8.52□□□□□ -1.05
RAB28-207ENST00000511649 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 NUDCQ9Y266 331 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
RAB28-207ENST00000511649 A0A1W2PRU2 124 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 MAN1A2O60476 641 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 NTSR2O95665 410 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 GNRH1P01148 92 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 GPTP24298 496 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 ST5P78524 1137 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 DEPDC4Q8N2C3 294 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 SMC1BQ8NDV3 1235 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
RAB28-207ENST00000511649 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 RAB6BQ9NRW1 208 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
RAB28-207ENST00000511649 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 PASKQ96RG2 1323 aa8.51□□□□□ -1.05
RAB28-207ENST00000511649 MYL6BP14649 208 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
RAB28-207ENST00000511649 NPR1P16066 1061 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 CLN3Q13286 438 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 CCDC146Q8IYE0 955 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 RNF217Q8TC41 542 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
RAB28-207ENST00000511649 IBTKQ9P2D0 1353 aaPredicted RBP8.49□□□□□ -1.05
RAB28-207ENST00000511649 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
RAB28-207ENST00000511649 MEN1O00255 615 aa8.49□□□□□ -1.05
RAB28-207ENST00000511649 FMR1Q06787 632 aaKnown RBP eCLIP8.49□□□□□ -1.05
RAB28-207ENST00000511649 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
RAB28-207ENST00000511649 TFIP11Q9UBB9 837 aaKnown RBP8.49□□□□□ -1.05
RAB28-207ENST00000511649 NOD1Q9Y239 953 aa8.49□□□□□ -1.05
RAB28-207ENST00000511649 MAFBQ9Y5Q3 323 aaPredicted RBP8.49□□□□□ -1.05
RAB28-207ENST00000511649 THSD7BQ9C0I4 1608 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 ERVV-1B6SEH8 477 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 FZD9O00144 591 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 IL2RAP01589 272 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 GPC1P35052 558 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 TMPOP42166 694 aaKnown RBP8.48□□□□□ -1.05
RAB28-207ENST00000511649 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
RAB28-207ENST00000511649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.48□□□□□ -1.05
RAB28-207ENST00000511649 CCDC93Q567U6 631 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 C16orf71Q8IYS4 520 aaPredicted RBP8.48□□□□□ -1.05
RAB28-207ENST00000511649 TAF1DQ9H5J8 278 aaPredicted RBP8.48□□□□□ -1.05
RAB28-207ENST00000511649 RNF123Q5XPI4 1314 aa8.48□□□□□ -1.05
RAB28-207ENST00000511649 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
RAB28-207ENST00000511649 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
RAB28-207ENST00000511649 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
RAB28-207ENST00000511649 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
RAB28-207ENST00000511649 GTF2IP78347 998 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms