RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 EXOC8Q8IYI6 725 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.6
POLR2J3-215ENST00000511313 BMP15O95972 392 aa11.27□□□□□ -0.6
POLR2J3-215ENST00000511313 GIMAP6Q6P9H5 292 aa11.27□□□□□ -0.6
POLR2J3-215ENST00000511313 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.6
POLR2J3-215ENST00000511313 AOC3Q16853 763 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 MB21D1Q8N884 522 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 ERMNQ8TAM6 284 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 TANGO6Q9C0B7 1094 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 ABCC4O15439 1325 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 M0QZ92 97 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 KIF20AO95235 890 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 RPLP2P05387 115 aaKnown RBP11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 GNPTABQ3T906 1256 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 STXBP4Q6ZWJ1 553 aa11.27□□□□□ -0.61
POLR2J3-215ENST00000511313 TLR3O15455 904 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 TKFCQ3LXA3 575 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 NTSR2O95665 410 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 CALML3P27482 149 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 FCGRTP55899 365 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 PLS1Q14651 629 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 SLC4A8Q2Y0W8 1093 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 ANKRD20A12PQ8NF67 263 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 SCLT1Q96NL6 688 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 KCNQ3O43525 872 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 CERKLQ49MI3 558 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 RSPH3Q86UC2 560 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 SUCLG2Q96I99 432 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
POLR2J3-215ENST00000511313 TFCP2Q12800 502 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 OSBPL5Q9H0X9 879 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 GREM2Q9H772 168 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 GNRH1P01148 92 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 TM4SF1P30408 202 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 CRKP46108 304 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 KDM6AO15550 1401 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 BTDP43251 543 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 ABCB5Q2M3G0 1257 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 ZNF396Q96N95 335 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 CSRNP1Q96S65 589 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 MRIQ9BWK5 157 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 LRP6O75581 1613 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 NFAT5O94916 1531 aa11.25□□□□□ -0.61
POLR2J3-215ENST00000511313 PITPNM2Q9BZ72 1349 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 GNA11P29992 359 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 MCM5P33992 734 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 SMARCC2Q8TAQ2 1214 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 RAET1EQ8TD07 263 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 PRAMEF22A3QJZ6 481 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 TEX2Q8IWB9 1127 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 CDHR1Q96JP9 859 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 SLKQ9H2G2 1235 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 ATP5JP18859 108 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 KCNQ4P56696 695 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 TAF1CQ15572 869 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 ANKRD23Q86SG2 305 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 PDS5AQ29RF7 1337 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 WTAPQ15007 396 aa11.24□□□□□ -0.61
POLR2J3-215ENST00000511313 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 CARNS1A5YM72 827 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 BCAMP50895 628 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 FAM151AQ8WW52 585 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
POLR2J3-215ENST00000511313 SMC3Q9UQE7 1217 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms