RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 STK11IPQ8N1F8 1099 aa6.24□□□□□ -1.41
SUB1-208ENST00000511175 CCDC97Q96F63 343 aaPredicted RBP6.24□□□□□ -1.41
SUB1-208ENST00000511175 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
SUB1-208ENST00000511175 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
SUB1-208ENST00000511175 BIN1O00499 593 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 FUT4P22083 530 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 FKBP4Q02790 459 aaKnown RBP eCLIP6.23□□□□□ -1.41
SUB1-208ENST00000511175 ZNF211Q13398 564 aaPredicted RBP6.23□□□□□ -1.41
SUB1-208ENST00000511175 HP1BP3Q5SSJ5 553 aaPredicted RBP6.23□□□□□ -1.41
SUB1-208ENST00000511175 PHLDB3Q6NSJ2 640 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 GLIS3Q8NEA6 775 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 ZNF576Q9H609 170 aa6.23□□□□□ -1.41
SUB1-208ENST00000511175 MBNL3Q9NUK0 354 aaKnown RBP6.23□□□□□ -1.41
SUB1-208ENST00000511175 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 FAM87AP0C7U9 286 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 LIG1P18858 919 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 CYP27C1Q4G0S4 372 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
SUB1-208ENST00000511175 ZFYVE1Q9HBF4 777 aa6.22□□□□□ -1.41
SUB1-208ENST00000511175 DBX1A6NMT0 343 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 TMPRSS2O15393 492 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 ABL1P00519 1130 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 ATG4DQ86TL0 474 aaPredicted RBP6.21□□□□□ -1.42
SUB1-208ENST00000511175 NETO1Q8TDF5 533 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 FAM168AQ92567 244 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 ZC3H12CQ9C0D7 883 aaKnown RBP6.21□□□□□ -1.42
SUB1-208ENST00000511175 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
SUB1-208ENST00000511175 SERPINA10Q9UK55 444 aa6.21□□□□□ -1.42
SUB1-208ENST00000511175 LEFTY1O75610 366 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 FARP2O94887 1054 aaPredicted RBP6.2□□□□□ -1.42
SUB1-208ENST00000511175 ITPKAP23677 461 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 SF3B2Q13435 895 aaKnown RBP6.2□□□□□ -1.42
SUB1-208ENST00000511175 FBLN7Q53RD9 439 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 KIAA0319Q5VV43 1072 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 LRRN4CLQ8ND94 238 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 MISP3Q96FF7 219 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 CRIM1Q9NZV1 1036 aa6.2□□□□□ -1.42
SUB1-208ENST00000511175 ARID3CA6NKF2 412 aa6.19□□□□□ -1.42
SUB1-208ENST00000511175 ZNF157P51786 506 aaPredicted RBP6.19□□□□□ -1.42
SUB1-208ENST00000511175 DDX54Q8TDD1 881 aaKnown RBP6.19□□□□□ -1.42
SUB1-208ENST00000511175 FANCD2OSQ96PS1 177 aa6.19□□□□□ -1.42
SUB1-208ENST00000511175 EHD4Q9H223 541 aa6.19□□□□□ -1.42
SUB1-208ENST00000511175 DISC1Q9NRI5 854 aa6.19□□□□□ -1.42
SUB1-208ENST00000511175 ZNF862O60290 1169 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 ORC1Q13415 861 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 PIDD1Q9HB75 910 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 NPHS2Q9NP85 383 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 VAV3Q9UKW4 847 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 PLAGL2Q9UPG8 496 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 SYNGAP1Q96PV0 1343 aa6.18□□□□□ -1.42
SUB1-208ENST00000511175 HCLS1P14317 486 aaPredicted RBP6.17□□□□□ -1.42
SUB1-208ENST00000511175 PRKCQQ04759 706 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 FAAP100Q0VG06 881 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 AP3B2Q13367 1082 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 AOC3Q16853 763 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 SMYD4Q8IYR2 804 aaPredicted RBP6.17□□□□□ -1.42
SUB1-208ENST00000511175 TMEM40Q8WWA1 233 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 ABCB6Q9NP58 842 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 PCDHGC5Q9Y5F6 944 aa6.17□□□□□ -1.42
SUB1-208ENST00000511175 RNGTTO60942 597 aaKnown RBP6.16□□□□□ -1.42
SUB1-208ENST00000511175 OXCT1P55809 520 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 ID3Q02535 119 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 MESP2Q0VG99 397 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 TTLL4Q14679 1199 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 ECM1Q16610 540 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 IFI16Q16666 785 aaKnown RBP6.16□□□□□ -1.42
SUB1-208ENST00000511175 KSR1Q8IVT5 923 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 DUSP23Q9BVJ7 150 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 ATXN3LQ9H3M9 355 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
SUB1-208ENST00000511175 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
SUB1-208ENST00000511175 PKN1Q16512 942 aa6.15□□□□□ -1.42
SUB1-208ENST00000511175 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
SUB1-208ENST00000511175 MTMR7Q9Y216 660 aa6.15□□□□□ -1.42
SUB1-208ENST00000511175 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 CEACAM5P06731 702 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 NEFMP07197 916 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 PTPN12Q05209 780 aaKnown RBP6.14□□□□□ -1.43
SUB1-208ENST00000511175 KIF4BQ2VIQ3 1234 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 HRASLS5Q96KN8 279 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 BRPF3Q9ULD4 1205 aa6.14□□□□□ -1.43
SUB1-208ENST00000511175 ICMTO60725 284 aa6.13□□□□□ -1.43
SUB1-208ENST00000511175 CPNE3O75131 537 aaKnown RBP6.13□□□□□ -1.43
SUB1-208ENST00000511175 GSTP1P09211 210 aaKnown RBP6.13□□□□□ -1.43
SUB1-208ENST00000511175 ITIH2P19823 946 aa6.13□□□□□ -1.43
SUB1-208ENST00000511175 PRPF40BQ6NWY9 871 aaKnown RBP6.13□□□□□ -1.43
SUB1-208ENST00000511175 ARHGAP27Q6ZUM4 889 aa6.13□□□□□ -1.43
SUB1-208ENST00000511175 TMEM265A0A087WTH1 108 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
SUB1-208ENST00000511175 CILP2Q8IUL8 1156 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 TOP6BLQ8N6T0 577 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 ISL2Q96A47 359 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 CCDC74AQ96AQ1 378 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 HEXIM2Q96MH2 286 aaKnown RBP6.12□□□□□ -1.43
SUB1-208ENST00000511175 SLC38A3Q99624 504 aa6.12□□□□□ -1.43
SUB1-208ENST00000511175 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms