RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 ITPRIPQ8IWB1 547 aa14.9□□□□□ -0.02
CHFR-208ENST00000511001 TMOD2Q9NZR1 351 aa14.9□□□□□ -0.02
CHFR-208ENST00000511001 DOCK2Q92608 1830 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 MANSC4A6NHS7 340 aaPredicted RBP14.89□□□□□ -0.03
CHFR-208ENST00000511001 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
CHFR-208ENST00000511001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHFR-208ENST00000511001 PANK1Q8TE04 598 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 NEUROD6Q96NK8 337 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 R3HDMLQ9H3Y0 253 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 PCDH10Q9P2E7 1040 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 GAKO14976 1311 aa14.89□□□□□ -0.03
CHFR-208ENST00000511001 NFIAQ12857 509 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 PI16Q6UXB8 463 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 ZGPATQ8N5A5 531 aaKnown RBP14.88□□□□□ -0.03
CHFR-208ENST00000511001 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 ELP3Q9H9T3 547 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 HMG20BQ9P0W2 317 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 FAM198AQ9UFP1 575 aa14.88□□□□□ -0.03
CHFR-208ENST00000511001 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
CHFR-208ENST00000511001 RFX7Q2KHR2 1363 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 IGF2BP3O00425 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHFR-208ENST00000511001 ARID4AP29374 1257 aaPredicted RBP14.87□□□□□ -0.03
CHFR-208ENST00000511001 MAP3K9P80192 1104 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 VGLL4Q14135 290 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 ZNF384Q8TF68 577 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 FAM151AQ8WW52 585 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
CHFR-208ENST00000511001 GPR108Q9NPR9 543 aa14.87□□□□□ -0.03
CHFR-208ENST00000511001 CDK5RAP2Q96SN8 1893 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 TESPA1A2RU30 521 aaPredicted RBP14.86□□□□□ -0.03
CHFR-208ENST00000511001 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
CHFR-208ENST00000511001 MCAMP43121 646 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 INHBEP58166 350 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 NOM1Q5C9Z4 860 aaKnown RBP14.86□□□□□ -0.03
CHFR-208ENST00000511001 CEP85Q6P2H3 762 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 ZFPM1Q8IX07 1006 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 ZNF296Q8WUU4 475 aaPredicted RBP14.86□□□□□ -0.03
CHFR-208ENST00000511001 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 USP40Q9NVE5 1235 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 ABCF2Q9UG63 623 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 SNCAIPQ9Y6H5 919 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
CHFR-208ENST00000511001 MAST2Q6P0Q8 1798 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 GPR25O00155 361 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 SOX10P56693 466 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 TCP10Q12799 353 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 SPTY2D1Q68D10 685 aaPredicted RBP14.85□□□□□ -0.03
CHFR-208ENST00000511001 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
CHFR-208ENST00000511001 SPATA5Q8NB90 893 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 PTPN18Q99952 460 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
CHFR-208ENST00000511001 ALDH1A1P00352 501 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 MECOMQ03112 1051 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 GORABQ5T7V8 394 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 MIGA2Q7L4E1 593 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 CTU1Q7Z7A3 348 aaKnown RBP14.84□□□□□ -0.03
CHFR-208ENST00000511001 WRNIP1Q96S55 665 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 IDI2Q9BXS1 227 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
CHFR-208ENST00000511001 FOCADQ5VW36 1801 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 SPDYE5A6NIY4 337 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 WDHD1O75717 1129 aaPredicted RBP14.83□□□□□ -0.04
CHFR-208ENST00000511001 UQCRFS1P1P0C7P4 283 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 INPP5BP32019 993 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 BTDP43251 543 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 RGS3P49796 1198 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 RHBDL3P58872 404 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 OS9Q13438 667 aaPredicted RBP14.83□□□□□ -0.04
CHFR-208ENST00000511001 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 BRI3BPQ8WY22 251 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 ZKSCAN4Q969J2 545 aaPredicted RBP14.83□□□□□ -0.04
CHFR-208ENST00000511001 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 DDX4Q9NQI0 724 aaKnown RBP14.83□□□□□ -0.04
CHFR-208ENST00000511001 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 CSADQ9Y600 493 aa14.83□□□□□ -0.04
CHFR-208ENST00000511001 PHIPQ8WWQ0 1821 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 PTPRFP10586 1907 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 GPR75-ASB3A0A0A6YYF3 556 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 ENTPD3O75355 529 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 SLF2Q8IX21 1173 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 NSUN4Q96CB9 384 aaKnown RBP14.82□□□□□ -0.04
CHFR-208ENST00000511001 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 RCAN3Q9UKA8 241 aa14.82□□□□□ -0.04
CHFR-208ENST00000511001 DOCK1Q14185 1865 aa14.81□□□□□ -0.04
CHFR-208ENST00000511001 FKTNO75072 461 aa14.81□□□□□ -0.04
CHFR-208ENST00000511001 MS4A1P11836 297 aa14.81□□□□□ -0.04
CHFR-208ENST00000511001 TTC39AQ5SRH9 613 aa14.81□□□□□ -0.04
CHFR-208ENST00000511001 ERO1BQ86YB8 467 aa14.81□□□□□ -0.04
CHFR-208ENST00000511001 EAF2Q96CJ1 260 aaPredicted RBP14.81□□□□□ -0.04
CHFR-208ENST00000511001 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms