RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SLC26A8Q96RN1 970 aa6.89□□□□□ -1.31
NIPBL-206ENST00000509429 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
NIPBL-206ENST00000509429 CDK11AQ9UQ88 783 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-206ENST00000509429 LOC105371045A0A1W2PR82 267 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 ATP9BO43861 1147 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 ACPPP15309 386 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 GSTM4Q03013 218 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 AKAP4Q5JQC9 854 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
NIPBL-206ENST00000509429 INSRRP14616 1297 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 CDK5R2Q13319 367 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
NIPBL-206ENST00000509429 COX20Q5RI15 118 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 TMEM102Q8N9M5 508 aaPredicted RBP6.87□□□□□ -1.31
NIPBL-206ENST00000509429 WDR26Q9H7D7 661 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 KANSL3Q9P2N6 904 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 AP4E1Q9UPM8 1137 aa6.87□□□□□ -1.31
NIPBL-206ENST00000509429 TRPA1O75762 1119 aa6.86□□□□□ -1.31
NIPBL-206ENST00000509429 SRFP11831 508 aa6.86□□□□□ -1.31
NIPBL-206ENST00000509429 WEE1P30291 646 aa6.86□□□□□ -1.31
NIPBL-206ENST00000509429 CHMP4AQ9BY43 222 aa6.86□□□□□ -1.31
NIPBL-206ENST00000509429 NRSN2Q9GZP1 204 aa6.86□□□□□ -1.31
NIPBL-206ENST00000509429 SPATS1Q496A3 300 aa6.85□□□□□ -1.31
NIPBL-206ENST00000509429 HP1BP3Q5SSJ5 553 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-206ENST00000509429 XYLT2Q9H1B5 865 aa6.85□□□□□ -1.31
NIPBL-206ENST00000509429 RAD18Q9NS91 495 aa6.85□□□□□ -1.31
NIPBL-206ENST00000509429 TRIM13O60858 407 aa6.84□□□□□ -1.31
NIPBL-206ENST00000509429 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
NIPBL-206ENST00000509429 CDK11BP21127 795 aaKnown RBP6.84□□□□□ -1.31
NIPBL-206ENST00000509429 BRD2P25440 801 aaKnown RBP6.84□□□□□ -1.31
NIPBL-206ENST00000509429 MYRFQ9Y2G1 1151 aa6.84□□□□□ -1.31
NIPBL-206ENST00000509429 GDNFP39905 211 aa6.83□□□□□ -1.32
NIPBL-206ENST00000509429 PDE4CQ08493 712 aa6.83□□□□□ -1.32
NIPBL-206ENST00000509429 TCERG1LQ5VWI1 586 aa6.83□□□□□ -1.32
NIPBL-206ENST00000509429 BAHD1Q8TBE0 780 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-206ENST00000509429 NXPE3Q969Y0 559 aa6.83□□□□□ -1.32
NIPBL-206ENST00000509429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.83□□□□□ -1.32
NIPBL-206ENST00000509429 ITIH2P19823 946 aa6.82□□□□□ -1.32
NIPBL-206ENST00000509429 EFEMP1Q12805 493 aa6.82□□□□□ -1.32
NIPBL-206ENST00000509429 C19orf73Q9NVV2 129 aa6.82□□□□□ -1.32
NIPBL-206ENST00000509429 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
NIPBL-206ENST00000509429 SUPT5HO00267 1087 aaKnown RBP6.81□□□□□ -1.32
NIPBL-206ENST00000509429 MAOBP27338 520 aa6.81□□□□□ -1.32
NIPBL-206ENST00000509429 DPYDQ12882 1025 aa6.81□□□□□ -1.32
NIPBL-206ENST00000509429 SASH1O94885 1247 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 UBTFP17480 764 aaKnown RBP6.8□□□□□ -1.32
NIPBL-206ENST00000509429 LSRQ86X29 649 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-206ENST00000509429 UCN2Q96RP3 112 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 ELP3Q9H9T3 547 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 ZFYVE1Q9HBF4 777 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
NIPBL-206ENST00000509429 LEFTY1O75610 366 aa6.79□□□□□ -1.32
NIPBL-206ENST00000509429 NEFLP07196 543 aa6.79□□□□□ -1.32
NIPBL-206ENST00000509429 CTSBP07858 339 aa6.79□□□□□ -1.32
NIPBL-206ENST00000509429 PDE12Q6L8Q7 609 aaKnown RBP6.79□□□□□ -1.32
NIPBL-206ENST00000509429 LARP1Q6PKG0 1096 aaKnown RBP6.79□□□□□ -1.32
NIPBL-206ENST00000509429 OTOL1A6NHN0 477 aaPredicted RBP6.78□□□□□ -1.32
NIPBL-206ENST00000509429 CYP11A1P05108 521 aa6.78□□□□□ -1.32
NIPBL-206ENST00000509429 TAF7LQ5H9L4 462 aa6.78□□□□□ -1.32
NIPBL-206ENST00000509429 DUSP23Q9BVJ7 150 aa6.78□□□□□ -1.32
NIPBL-206ENST00000509429 HMGB1P09429 215 aaKnown RBP6.77□□□□□ -1.33
NIPBL-206ENST00000509429 CES1P23141 567 aa6.77□□□□□ -1.33
NIPBL-206ENST00000509429 FAM26DQ5JW98 314 aa6.77□□□□□ -1.33
NIPBL-206ENST00000509429 POU4F3Q15319 338 aa6.76□□□□□ -1.33
NIPBL-206ENST00000509429 GPR152Q8TDT2 470 aa6.76□□□□□ -1.33
NIPBL-206ENST00000509429 OSMRQ99650 979 aa6.76□□□□□ -1.33
NIPBL-206ENST00000509429 ZXDAP98168 799 aa6.75□□□□□ -1.33
NIPBL-206ENST00000509429 PTK7Q13308 1070 aa6.75□□□□□ -1.33
NIPBL-206ENST00000509429 ZNF385BQ569K4 471 aa6.75□□□□□ -1.33
NIPBL-206ENST00000509429 GPR20Q99678 358 aa6.75□□□□□ -1.33
NIPBL-206ENST00000509429 SRRDQ9UH36 339 aa6.75□□□□□ -1.33
NIPBL-206ENST00000509429 HSP90B1P14625 803 aaKnown RBP6.74□□□□□ -1.33
NIPBL-206ENST00000509429 ZAP70P43403 619 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 TMEM151BQ8IW70 566 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 C1orf127Q8N9H9 656 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 ABHD4Q8TB40 342 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
NIPBL-206ENST00000509429 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
NIPBL-206ENST00000509429 AOC2O75106 756 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 DLG4P78352 724 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 ZNF438Q7Z4V0 828 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 ADAMTS19Q8TE59 1207 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
NIPBL-206ENST00000509429 SEMA3GQ9NS98 782 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
NIPBL-206ENST00000509429 ANKMY2Q8IV38 441 aa6.72□□□□□ -1.33
NIPBL-206ENST00000509429 WWC1Q8IX03 1113 aa6.72□□□□□ -1.33
NIPBL-206ENST00000509429 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
NIPBL-206ENST00000509429 HEXIM2Q96MH2 286 aaKnown RBP6.72□□□□□ -1.33
NIPBL-206ENST00000509429 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
NIPBL-206ENST00000509429 PMEPA1Q969W9 287 aa6.71□□□□□ -1.34
NIPBL-206ENST00000509429 MENTQ9BUN1 341 aa6.71□□□□□ -1.34
NIPBL-206ENST00000509429 BHLHE41Q9C0J9 482 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-206ENST00000509429 SAP130Q9H0E3 1048 aa6.71□□□□□ -1.34
NIPBL-206ENST00000509429 C16orf46Q6P387 395 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms