RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 NEDD4P46934 1319 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 CYB5R4Q7L1T6 521 aa12.74□□□□□ -0.37
SEC31A-228ENST00000509142 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
SEC31A-228ENST00000509142 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 USP27XA6NNY8 438 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 CTIFO43310 598 aaKnown RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 CDC5LQ99459 802 aaKnown RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 PCDHA7Q9UN72 937 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 ITPK1Q13572 414 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 STX1AQ16623 288 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 DHX40Q8IX18 779 aaKnown RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
SEC31A-228ENST00000509142 RTEL1Q9NZ71 1219 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 SLC12A7Q9Y666 1083 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 A0A1B0GVL5 298 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 SPTLC2O15270 562 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
SEC31A-228ENST00000509142 ERICH2A1L162 156 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
SEC31A-228ENST00000509142 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
SEC31A-228ENST00000509142 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
SEC31A-228ENST00000509142 MYSM1Q5VVJ2 828 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 CLIC4Q9Y696 253 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 ZMYM6O95789 1325 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 CHRNDQ07001 517 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 APOA5Q6Q788 366 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 PHKBQ93100 1093 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
SEC31A-228ENST00000509142 ANO10Q9NW15 660 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 LRP6O75581 1613 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
SEC31A-228ENST00000509142 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
SEC31A-228ENST00000509142 TCRBV5S4A2TA0A5A2 114 aa12.71□□□□□ -0.37
SEC31A-228ENST00000509142 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.37
SEC31A-228ENST00000509142 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
SEC31A-228ENST00000509142 ANKRD18AQ8IVF6 992 aa12.71□□□□□ -0.37
SEC31A-228ENST00000509142 KRT23Q9C075 422 aa12.71□□□□□ -0.37
SEC31A-228ENST00000509142 KCNQ2O43526 872 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 PRKAB2O43741 272 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 GNAT2P19087 354 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 CYP7A1P22680 504 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 ALX1Q15699 326 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 AIFM3Q96NN9 605 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.38
SEC31A-228ENST00000509142 NUP98P52948 1817 aa12.71□□□□□ -0.38
SEC31A-228ENST00000509142 YEATS4O95619 227 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 MINDY4BA8MYZ0 360 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 NTSR2O95665 410 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 SLC26A6Q9BXS9 759 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 KRT40Q6A162 431 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 ZKSCAN3Q9BRR0 538 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 SENP2Q9HC62 589 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 EPB41L4AQ9HCS5 686 aaPredicted RBP12.7□□□□□ -0.38
SEC31A-228ENST00000509142 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
SEC31A-228ENST00000509142 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 DDX60Q8IY21 1712 aaKnown RBP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 MYH3P11055 1940 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 A0A1W2PQ27 194 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 A0A1W2PQ64 194 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 A0A1W2PQD8 194 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 CDC27P30260 824 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 NDUFA8P51970 172 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 CBX1P83916 185 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 NBPF11Q86T75 865 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms