RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 TMOD2Q9NZR1 351 aa28.82■■■□□ 2.2
CSNK1G3-204ENST00000508708 ABCF2Q9UG63 623 aa28.82■■■□□ 2.2
CSNK1G3-204ENST00000508708 RFX7Q2KHR2 1363 aa28.82■■■□□ 2.2
CSNK1G3-204ENST00000508708 UQCRFS1P1P0C7P4 283 aa28.81■■■□□ 2.2
CSNK1G3-204ENST00000508708 TSKSQ9UJT2 592 aa28.81■■■□□ 2.2
CSNK1G3-204ENST00000508708 LAMB1P07942 1786 aa28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 UNCXA6NJT0 531 aa28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 SPTY2D1Q68D10 685 aaPredicted RBP28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 DZIP1Q86YF9 867 aaKnown RBP28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 ERC1Q8IUD2 1116 aa28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 CLMNQ96JQ2 1002 aa28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 ZNF512BQ96KM6 892 aaPredicted RBP28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 CHMP4BQ9H444 224 aaKnown RBP28.8■■■□□ 2.2
CSNK1G3-204ENST00000508708 NFIAQ12857 509 aa28.79■■■□□ 2.2
CSNK1G3-204ENST00000508708 FAM163AQ96GL9 167 aaPredicted RBP28.79■■■□□ 2.2
CSNK1G3-204ENST00000508708 MECOMQ03112 1051 aa28.78■■■□□ 2.2
CSNK1G3-204ENST00000508708 TBC1D9Q6ZT07 1266 aa28.78■■■□□ 2.2
CSNK1G3-204ENST00000508708 MAST2Q6P0Q8 1798 aa28.78■■■□□ 2.2
CSNK1G3-204ENST00000508708 MROH7-TTC4A0A0A0MT08 1334 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 IREB2P48200 963 aaKnown RBP28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 CCDC158Q5M9N0 1113 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 TTC39AQ5SRH9 613 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 SPRYD7Q5W111 196 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 ERICH6Q7L0X2 663 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 REM2Q8IYK8 340 aaPredicted RBP28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 CCDC8Q9H0W5 538 aaPredicted RBP28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 SAGE1Q9NXZ1 904 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 FAM198AQ9UFP1 575 aa28.77■■■□□ 2.2
CSNK1G3-204ENST00000508708 HMMRO75330 724 aa28.76■■■□□ 2.19
CSNK1G3-204ENST00000508708 HSP90AB4PQ58FF6 505 aa28.76■■■□□ 2.19
CSNK1G3-204ENST00000508708 NSUN4Q96CB9 384 aaKnown RBP28.76■■■□□ 2.19
CSNK1G3-204ENST00000508708 YTHDC1Q96MU7 727 aaKnown RBP28.76■■■□□ 2.19
CSNK1G3-204ENST00000508708 ANKRD13AQ8IZ07 590 aa28.75■■■□□ 2.19
CSNK1G3-204ENST00000508708 RHPN1Q8TCX5 695 aa28.75■■■□□ 2.19
CSNK1G3-204ENST00000508708 FAM151AQ8WW52 585 aa28.75■■■□□ 2.19
CSNK1G3-204ENST00000508708 USP40Q9NVE5 1235 aa28.75■■■□□ 2.19
CSNK1G3-204ENST00000508708 RNF186Q9NXI6 227 aa28.75■■■□□ 2.19
CSNK1G3-204ENST00000508708 MKRN3Q13064 507 aaKnown RBP28.74■■■□□ 2.19
CSNK1G3-204ENST00000508708 IFFO2Q5TF58 517 aa28.74■■■□□ 2.19
CSNK1G3-204ENST00000508708 SLF2Q8IX21 1173 aa28.74■■■□□ 2.19
CSNK1G3-204ENST00000508708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.74■■■□□ 2.19
CSNK1G3-204ENST00000508708 SNRKQ9NRH2 765 aa28.74■■■□□ 2.19
CSNK1G3-204ENST00000508708 BTDP43251 543 aa28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 TNS4Q8IZW8 715 aa28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 SLC10A4Q96EP9 437 aa28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 WNK4Q96J92 1243 aa28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 IDI2Q9BXS1 227 aa28.73■■■□□ 2.19
CSNK1G3-204ENST00000508708 GPR75-ASB3A0A0A6YYF3 556 aa28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 CYP2E1P05181 493 aaPredicted RBP28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 ZBTB48P10074 688 aaPredicted RBP28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 GJA5P36382 358 aa28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 TM4SF4P48230 202 aa28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 AACSQ86V21 672 aa28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 IL1RAPL2Q9NP60 686 aa28.72■■■□□ 2.19
CSNK1G3-204ENST00000508708 WDHD1O75717 1129 aaPredicted RBP28.71■■■□□ 2.19
CSNK1G3-204ENST00000508708 RHBDL3P58872 404 aa28.71■■■□□ 2.19
CSNK1G3-204ENST00000508708 TCP10Q12799 353 aa28.71■■■□□ 2.19
CSNK1G3-204ENST00000508708 KIF1BPQ96EK5 621 aa28.71■■■□□ 2.19
CSNK1G3-204ENST00000508708 ATRNL1Q5VV63 1379 aa28.71■■■□□ 2.19
CSNK1G3-204ENST00000508708 MYO5AQ9Y4I1 1855 aaKnown RBP28.7■■■□□ 2.19
CSNK1G3-204ENST00000508708 ZAP70P43403 619 aa28.7■■■□□ 2.18
CSNK1G3-204ENST00000508708 RRP1P56182 461 aaKnown RBP28.7■■■□□ 2.18
CSNK1G3-204ENST00000508708 VGLL4Q14135 290 aa28.7■■■□□ 2.18
CSNK1G3-204ENST00000508708 ZFPM1Q8IX07 1006 aa28.7■■■□□ 2.18
CSNK1G3-204ENST00000508708 RAI14Q9P0K7 980 aa28.7■■■□□ 2.18
CSNK1G3-204ENST00000508708 TRPA1O75762 1119 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 RGS3P49796 1198 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 MAP3K9P80192 1104 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 HOOK2Q96ED9 719 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 LRP2BPQ9P2M1 347 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 DOCK2Q92608 1830 aa28.69■■■□□ 2.18
CSNK1G3-204ENST00000508708 ENTPD3O75355 529 aa28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 GSTO1P78417 241 aa28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 SREBF2Q12772 1141 aa28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 ELP3Q9H9T3 547 aa28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 DDX4Q9NQI0 724 aaKnown RBP28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 CASP8AP2Q9UKL3 1982 aa28.68■■■□□ 2.18
CSNK1G3-204ENST00000508708 RAB11FIP3O75154 756 aa28.67■■■□□ 2.18
CSNK1G3-204ENST00000508708 PIH1D3Q9NQM4 214 aaKnown RBP28.67■■■□□ 2.18
CSNK1G3-204ENST00000508708 MANSC4A6NHS7 340 aaPredicted RBP28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 APBB1O00213 710 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 LDHCP07864 332 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 DCAF15Q66K64 600 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 SH3BP5LQ7L8J4 393 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 CNKSR2Q8WXI2 1034 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 WRNIP1Q96S55 665 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 SNCAIPQ9Y6H5 919 aa28.66■■■□□ 2.18
CSNK1G3-204ENST00000508708 IGSF3O75054 1194 aa28.65■■■□□ 2.18
CSNK1G3-204ENST00000508708 MIGA2Q7L4E1 593 aa28.65■■■□□ 2.18
CSNK1G3-204ENST00000508708 CLASRPQ8N2M8 674 aaKnown RBP28.65■■■□□ 2.18
CSNK1G3-204ENST00000508708 OPTNQ96CV9 577 aa28.65■■■□□ 2.18
CSNK1G3-204ENST00000508708 NPM3O75607 178 aaKnown RBP28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 MAP4K4O95819 1239 aaPredicted RBP28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 ADGRA1Q86SQ6 560 aa28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 ZNF341Q9BYN7 854 aa28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 CSADQ9Y600 493 aa28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 NDUFB9Q9Y6M9 179 aa28.64■■■□□ 2.18
CSNK1G3-204ENST00000508708 AK9Q5TCS8 1911 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms