RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 TEPSINQ96N21 525 aa18.45■□□□□ 0.54
TRIO-211ENST00000508343 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
TRIO-211ENST00000508343 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
TRIO-211ENST00000508343 ANGEL1Q9UNK9 670 aaKnown RBP18.45■□□□□ 0.54
TRIO-211ENST00000508343 SLC10A3P09131 477 aa18.44■□□□□ 0.54
TRIO-211ENST00000508343 MAP3K11Q16584 847 aa18.44■□□□□ 0.54
TRIO-211ENST00000508343 RAI14Q9P0K7 980 aa18.44■□□□□ 0.54
TRIO-211ENST00000508343 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
TRIO-211ENST00000508343 GAKO14976 1311 aa18.44■□□□□ 0.54
TRIO-211ENST00000508343 LDHCP07864 332 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 GSTO1P78417 241 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 RASAL3Q86YV0 1011 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
TRIO-211ENST00000508343 ZIC5Q96T25 663 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 BEGAINQ9BUH8 593 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 FZD1Q9UP38 647 aa18.43■□□□□ 0.54
TRIO-211ENST00000508343 UNCXA6NJT0 531 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 USP2O75604 605 aaPredicted RBP18.42■□□□□ 0.54
TRIO-211ENST00000508343 CYP2E1P05181 493 aaPredicted RBP18.42■□□□□ 0.54
TRIO-211ENST00000508343 IFIT2P09913 472 aaKnown RBP18.42■□□□□ 0.54
TRIO-211ENST00000508343 ZAP70P43403 619 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 IREB2P48200 963 aaKnown RBP18.42■□□□□ 0.54
TRIO-211ENST00000508343 CDAN1Q8IWY9 1227 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 FAM151AQ8WW52 585 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 MROH7-TTC4A0A0A0MT08 1334 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 SSC5DA1L4H1 1573 aa18.42■□□□□ 0.54
TRIO-211ENST00000508343 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 GPR75-ASB3A0A0A6YYF3 556 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 FOXN1O15353 648 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 IGSF3O75054 1194 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 KIF23Q02241 960 aaPredicted RBP18.41■□□□□ 0.54
TRIO-211ENST00000508343 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
TRIO-211ENST00000508343 BTDP43251 543 aa18.4■□□□□ 0.54
TRIO-211ENST00000508343 CTCFP49711 727 aaPredicted RBP18.4■□□□□ 0.54
TRIO-211ENST00000508343 NFIAQ12857 509 aa18.4■□□□□ 0.54
TRIO-211ENST00000508343 HOOK2Q96ED9 719 aa18.4■□□□□ 0.54
TRIO-211ENST00000508343 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
TRIO-211ENST00000508343 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
TRIO-211ENST00000508343 AKAP11Q9UKA4 1901 aa18.39■□□□□ 0.53
TRIO-211ENST00000508343 REM2Q8IYK8 340 aaPredicted RBP18.39■□□□□ 0.53
TRIO-211ENST00000508343 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
TRIO-211ENST00000508343 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
TRIO-211ENST00000508343 FAM198AQ9UFP1 575 aa18.39■□□□□ 0.53
TRIO-211ENST00000508343 CA12O43570 354 aa18.38■□□□□ 0.53
TRIO-211ENST00000508343 MAP4K4O95819 1239 aaPredicted RBP18.38■□□□□ 0.53
TRIO-211ENST00000508343 TCP10Q12799 353 aa18.38■□□□□ 0.53
TRIO-211ENST00000508343 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
TRIO-211ENST00000508343 ANKRD13AQ8IZ07 590 aa18.38■□□□□ 0.53
TRIO-211ENST00000508343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRIO-211ENST00000508343 CSRNP1Q96S65 589 aa18.38■□□□□ 0.53
TRIO-211ENST00000508343 PIH1D3Q9NQM4 214 aaKnown RBP18.38■□□□□ 0.53
TRIO-211ENST00000508343 RPAP1Q9BWH6 1393 aaPredicted RBP18.38■□□□□ 0.53
TRIO-211ENST00000508343 ENTPD3O75355 529 aa18.37■□□□□ 0.53
TRIO-211ENST00000508343 RGS3P49796 1198 aa18.37■□□□□ 0.53
TRIO-211ENST00000508343 CLMNQ96JQ2 1002 aa18.37■□□□□ 0.53
TRIO-211ENST00000508343 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
TRIO-211ENST00000508343 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
TRIO-211ENST00000508343 RHBDL3P58872 404 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 MAP3K9P80192 1104 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 SPRYD7Q5W111 196 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 DCAF15Q66K64 600 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
TRIO-211ENST00000508343 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
TRIO-211ENST00000508343 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
TRIO-211ENST00000508343 IDH1O75874 414 aaKnown RBP18.35■□□□□ 0.53
TRIO-211ENST00000508343 BAG3O95817 575 aa18.35■□□□□ 0.53
TRIO-211ENST00000508343 AAMPQ13685 434 aa18.35■□□□□ 0.53
TRIO-211ENST00000508343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRIO-211ENST00000508343 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
TRIO-211ENST00000508343 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 ZBTB48P10074 688 aaPredicted RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 HSPA8P11142 646 aaKnown RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 LBX1P52954 281 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 PPP4CP60510 307 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 MAP3K12Q12852 859 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 TTF1Q15361 905 aaPredicted RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 ZNF341Q9BYN7 854 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
TRIO-211ENST00000508343 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
TRIO-211ENST00000508343 RFX7Q2KHR2 1363 aa18.33■□□□□ 0.53
TRIO-211ENST00000508343 PLCG2P16885 1265 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 ATP5JP18859 108 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 TM4SF4P48230 202 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 PICALMQ13492 652 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 COL13A1Q5TAT6 717 aaPredicted RBP18.33■□□□□ 0.52
TRIO-211ENST00000508343 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 RNF186Q9NXI6 227 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 AATFQ9NY61 560 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRIO-211ENST00000508343 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
TRIO-211ENST00000508343 CSADQ9Y600 493 aa18.33■□□□□ 0.52
TRIO-211ENST00000508343 CYP7A1P22680 504 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms