RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 USP40Q9NVE5 1235 aa11.53□□□□□ -0.56
DDX41-209ENST00000508279 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
DDX41-209ENST00000508279 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
DDX41-209ENST00000508279 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
DDX41-209ENST00000508279 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
DDX41-209ENST00000508279 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
DDX41-209ENST00000508279 OTOFQ9HC10 1997 aa11.52□□□□□ -0.56
DDX41-209ENST00000508279 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.57
DDX41-209ENST00000508279 MCAMP43121 646 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
DDX41-209ENST00000508279 PDE3AQ14432 1141 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 AACSQ86V21 672 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 ERC1Q8IUD2 1116 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 GPR108Q9NPR9 543 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
DDX41-209ENST00000508279 LRP2BPQ9P2M1 347 aa11.52□□□□□ -0.57
DDX41-209ENST00000508279 USP2O75604 605 aaPredicted RBP11.51□□□□□ -0.57
DDX41-209ENST00000508279 TRPA1O75762 1119 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 MECOMQ03112 1051 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 HSP90AB4PQ58FF6 505 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
DDX41-209ENST00000508279 CNKSR2Q8WXI2 1034 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
DDX41-209ENST00000508279 TEPSINQ96N21 525 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 CSRNP1Q96S65 589 aa11.51□□□□□ -0.57
DDX41-209ENST00000508279 DBNLQ9UJU6 430 aaKnown RBP11.51□□□□□ -0.57
DDX41-209ENST00000508279 BTDP43251 543 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 NFIAQ12857 509 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 MIGA2Q7L4E1 593 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 SIRT2Q8IXJ6 389 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 RHPN1Q8TCX5 695 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 ELP3Q9H9T3 547 aa11.5□□□□□ -0.57
DDX41-209ENST00000508279 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
DDX41-209ENST00000508279 CA12O43570 354 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 CAPN15O75808 1086 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 ZAP70P43403 619 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 GSTO1P78417 241 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 PICALMQ13492 652 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 LDLRAD1Q5T700 205 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 FAM83AQ86UY5 434 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 ZSCAN29Q8IWY8 852 aaPredicted RBP11.49□□□□□ -0.57
DDX41-209ENST00000508279 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 PRDM10Q9NQV6 1147 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 MROH7-TTC4A0A0A0MT08 1334 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 DOCK2Q92608 1830 aa11.49□□□□□ -0.57
DDX41-209ENST00000508279 LDHCP07864 332 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 IFIT2P09913 472 aaKnown RBP11.48□□□□□ -0.57
DDX41-209ENST00000508279 RGS3P49796 1198 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 RRP1P56182 461 aaKnown RBP11.48□□□□□ -0.57
DDX41-209ENST00000508279 MAP3K11Q16584 847 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 FKBP1CQ5VVH2 108 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 NAA16Q6N069 864 aaPredicted RBP11.48□□□□□ -0.57
DDX41-209ENST00000508279 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
DDX41-209ENST00000508279 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 KIF1BPQ96EK5 621 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 WNK4Q96J92 1243 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 WRNIP1Q96S55 665 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
DDX41-209ENST00000508279 RNF186Q9NXI6 227 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 FAM198AQ9UFP1 575 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 CSADQ9Y600 493 aa11.48□□□□□ -0.57
DDX41-209ENST00000508279 MAST2Q6P0Q8 1798 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 GAKO14976 1311 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
DDX41-209ENST00000508279 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 SREBF2Q12772 1141 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 DCAF15Q66K64 600 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 ZNF384Q8TF68 577 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 NSUN4Q96CB9 384 aaKnown RBP11.47□□□□□ -0.57
DDX41-209ENST00000508279 OPTNQ96CV9 577 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
DDX41-209ENST00000508279 ZBTB22O15209 634 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 SMARCA5O60264 1052 aaPredicted RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 RAB11FIP3O75154 756 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 TBC1D8O95759 1140 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 GJA5P36382 358 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 VGLL4Q14135 290 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDX41-209ENST00000508279 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 DNAJC2Q99543 621 aaKnown RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 ZNF341Q9BYN7 854 aa11.46□□□□□ -0.57
DDX41-209ENST00000508279 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.57
DDX41-209ENST00000508279 AATFQ9NY61 560 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDX41-209ENST00000508279 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.58
DDX41-209ENST00000508279 RPAP1Q9BWH6 1393 aaPredicted RBP11.45□□□□□ -0.58
DDX41-209ENST00000508279 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms