RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 STXBP5LQ9Y2K9 1186 aa11.63□□□□□ -0.55
UBE2D3-223ENST00000508249 RPAP1Q9BWH6 1393 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-223ENST00000508249 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
UBE2D3-223ENST00000508249 BCRP11274 1271 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 CACNB3P54284 484 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 PPIL2Q13356 520 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 GCKRQ14397 625 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 KIF22Q14807 665 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 ERO1BQ86YB8 467 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 CSADQ9Y600 493 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 AK9Q5TCS8 1911 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
UBE2D3-223ENST00000508249 PTPRCP08575 1304 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 SGPL1O95470 568 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 BMP8BP34820 402 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 CRKP46108 304 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 KCNJ4P48050 445 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 FOXO4P98177 505 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 SNAPC2Q13487 334 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 MFSD14BQ5SR56 506 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 ZNF804AQ7Z570 1209 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 DEFB123Q8N688 67 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 LINS1Q8NG48 757 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 DIS3LQ8TF46 1054 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 PAK6Q9NQU5 681 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 MTMR10Q9NXD2 777 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 TTF2Q9UNY4 1162 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 DOCK1Q14185 1865 aa11.61□□□□□ -0.55
UBE2D3-223ENST00000508249 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 RAET1EQ8TD07 263 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 CRISPLD2Q9H0B8 497 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 KCNH4Q9UQ05 1017 aa11.6□□□□□ -0.55
UBE2D3-223ENST00000508249 LTBP2Q14767 1821 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 PDHXO00330 501 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 EVI5O60447 810 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 INPP5BP32019 993 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 LRIT3Q3SXY7 679 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
UBE2D3-223ENST00000508249 ATRNL1Q5VV63 1379 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 INHAP05111 366 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 ELNP15502 786 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 BCAMP50895 628 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 ZNF594Q96JF6 807 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-223ENST00000508249 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 CYP2C8P10632 490 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 GYG1P46976 350 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 PPATQ06203 517 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 FAM83AQ86UY5 434 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 ZNF112Q9UJU3 913 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
UBE2D3-223ENST00000508249 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 FLT3LGP49771 235 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 UBXN2AP68543 259 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 APOBEC3HQ6NTF7 200 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.56□□□□□ -0.564e-11■□□□□ 10.1
UBE2D3-223ENST00000508249 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 TTC28Q96AY4 2481 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 DEFB118Q96PH6 123 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 ZMYND8Q9ULU4 1186 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-223ENST00000508249 ADCY3O60266 1144 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 HOXD10P28358 340 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 TNNI2P48788 182 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 IRF5Q13568 498 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 NOL9Q5SY16 702 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 C7orf61Q8IZ16 206 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 ZDHHC15Q96MV8 337 aa11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-223ENST00000508249 WDHD1O75717 1129 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 FCGRTP55899 365 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 TDHQ8IZJ6 230 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms