RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 GIMAP6Q6P9H5 292 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 NCOA7Q8NI08 942 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 SDR42E1Q8WUS8 393 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 DBNDD1Q9H9R9 158 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
SPSB4-203ENST00000508126 MROH7-TTC4A0A0A0MT08 1334 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
SPSB4-203ENST00000508126 DIXDC1Q155Q3 683 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 INTS4Q96HW7 963 aaKnown RBP19.24■□□□□ 0.67
SPSB4-203ENST00000508126 TCEANC2Q96MN5 208 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
SPSB4-203ENST00000508126 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
SPSB4-203ENST00000508126 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
SPSB4-203ENST00000508126 CHD4Q14839 1912 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 ECE2O60344 883 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 DDIT3P35638 169 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 PSMD1Q99460 953 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 NBPF3Q9H094 633 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
SPSB4-203ENST00000508126 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
SPSB4-203ENST00000508126 AOC3Q16853 763 aa19.22■□□□□ 0.67
SPSB4-203ENST00000508126 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
SPSB4-203ENST00000508126 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
SPSB4-203ENST00000508126 MCM5P33992 734 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 PPP4CP60510 307 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 TOB2Q14106 344 aaPredicted RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 DALRD3Q5D0E6 543 aaKnown RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 Q6ZUG5 572 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 ATP8A2Q9NTI2 1148 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 PLCG2P16885 1265 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 STRIP1Q5VSL9 837 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 MB21D2Q8IYB1 491 aaPredicted RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 KLHL34Q8N239 644 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 FAM163AQ96GL9 167 aaPredicted RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 LARP6Q9BRS8 491 aaKnown RBP19.21■□□□□ 0.67
SPSB4-203ENST00000508126 CNNM2Q9H8M5 875 aa19.21■□□□□ 0.67
SPSB4-203ENST00000508126 MYH2Q9UKX2 1941 aa19.2■□□□□ 0.66
SPSB4-203ENST00000508126 WDR19Q8NEZ3 1342 aa19.2■□□□□ 0.66
SPSB4-203ENST00000508126 PTGER2P43116 358 aa19.2■□□□□ 0.66
SPSB4-203ENST00000508126 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
SPSB4-203ENST00000508126 GAKO14976 1311 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 GPR75-ASB3A0A0A6YYF3 556 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 BTDP43251 543 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
SPSB4-203ENST00000508126 PPARAQ07869 468 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 AKNAD1Q5T1N1 836 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 CERS5Q8N5B7 392 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 STAG1Q8WVM7 1258 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 DCP1AQ9NPI6 582 aaPredicted RBP19.19■□□□□ 0.66
SPSB4-203ENST00000508126 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 TPCN1Q9ULQ1 816 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 CTDSPL2Q05D32 466 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 MFSD6Q6ZSS7 791 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 BRF1Q92994 677 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 LRRC2Q9BYS8 371 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 AGXT2Q9BYV1 514 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 KRT23Q9C075 422 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 VPS33BQ9H267 617 aa19.19■□□□□ 0.66
SPSB4-203ENST00000508126 ARPP21Q9UBL0 812 aaPredicted RBP19.19■□□□□ 0.66
SPSB4-203ENST00000508126 TTF2Q9UNY4 1162 aaKnown RBP19.19■□□□□ 0.66
SPSB4-203ENST00000508126 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.19■□□□□ 0.66
SPSB4-203ENST00000508126 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 MINDY4BA8MYZ0 360 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 PRC1O43663 620 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 LARGE1O95461 756 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 USP5P45974 858 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 ME3Q16798 604 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 FBXL16Q8N461 479 aa19.18■□□□□ 0.66
SPSB4-203ENST00000508126 SH3RF3Q8TEJ3 882 aaPredicted RBP19.18■□□□□ 0.66
SPSB4-203ENST00000508126 NEDD4P46934 1319 aa19.17■□□□□ 0.66
SPSB4-203ENST00000508126 F8W031 263 aaPredicted RBP19.17■□□□□ 0.66
SPSB4-203ENST00000508126 BRCA1P38398 1863 aaKnown RBP19.17■□□□□ 0.66
SPSB4-203ENST00000508126 DACT2Q5SW24 774 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 CTR9Q6PD62 1173 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 CHST3Q7LGC8 479 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 CCDC83Q8IWF9 413 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 LARGE2Q8N3Y3 721 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 DAGLAQ9Y4D2 1042 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 B4E1Z4 1266 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 USP17L12C9JPN9 530 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 USP17L21D6R901 530 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 PCP11498 1178 aaKnown RBP19.16■□□□□ 0.66
SPSB4-203ENST00000508126 AMOTL1Q8IY63 956 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 MXD3Q9BW11 206 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
SPSB4-203ENST00000508126 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
SPSB4-203ENST00000508126 ANTXR2P58335 489 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 NUCB2P80303 420 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 SBK1Q52WX2 424 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 TEKT1Q969V4 418 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 KCNQ5Q9NR82 932 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
SPSB4-203ENST00000508126 TOMM22Q9NS69 142 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 BAZ2AQ9UIF9 1905 aaKnown RBP19.15■□□□□ 0.66
SPSB4-203ENST00000508126 SCN9AQ15858 1988 aa19.15■□□□□ 0.66
SPSB4-203ENST00000508126 HHIPL2Q6UWX4 724 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms