RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
PTPN13-207ENST00000508063 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
PTPN13-207ENST00000508063 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
PTPN13-207ENST00000508063 OPTNQ96CV9 577 aa13.73□□□□□ -0.21
PTPN13-207ENST00000508063 ELP3Q9H9T3 547 aa13.73□□□□□ -0.21
PTPN13-207ENST00000508063 RPAP1Q9BWH6 1393 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-207ENST00000508063 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-207ENST00000508063 PHKA1P46020 1223 aa13.72□□□□□ -0.21
PTPN13-207ENST00000508063 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
PTPN13-207ENST00000508063 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
PTPN13-207ENST00000508063 SLF2Q8IX21 1173 aa13.72□□□□□ -0.21
PTPN13-207ENST00000508063 MIER1Q8N108 512 aa13.72□□□□□ -0.21
PTPN13-207ENST00000508063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPN13-207ENST00000508063 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
PTPN13-207ENST00000508063 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
PTPN13-207ENST00000508063 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPN13-207ENST00000508063 PRDX5P30044 214 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 GTF2A2P52657 109 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 TIMM10P62072 90 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 VGLL4Q14135 290 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-207ENST00000508063 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-207ENST00000508063 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 FAM151AQ8WW52 585 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 CLUAP1Q96AJ1 413 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 DAGLAQ9Y4D2 1042 aa13.71□□□□□ -0.21
PTPN13-207ENST00000508063 A0A1B0GUL7 405 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-207ENST00000508063 ADORA1P30542 326 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 GJA5P36382 358 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 TFCP2Q12800 502 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 G3BP1Q13283 466 aaKnown RBP eCLIP13.7□□□□□ -0.22
PTPN13-207ENST00000508063 FBXO46Q6PJ61 603 aaPredicted RBP13.7□□□□□ -0.22
PTPN13-207ENST00000508063 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
PTPN13-207ENST00000508063 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
PTPN13-207ENST00000508063 SPDYE5A6NIY4 337 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 ERO1BQ86YB8 467 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
PTPN13-207ENST00000508063 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 NEUROD6Q96NK8 337 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 USP40Q9NVE5 1235 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
PTPN13-207ENST00000508063 CCL15-CCL14A0A0B4J2E2 113 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 CCL15Q16663 113 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 R3HDMLQ9H3Y0 253 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
PTPN13-207ENST00000508063 MYH2Q9UKX2 1941 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 CETPP11597 493 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 TCP10Q12799 353 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 CRHR2Q13324 411 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 ARHGEF6Q15052 776 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-207ENST00000508063 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-207ENST00000508063 PTPN18Q99952 460 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 ZFYVE28Q9HCC9 887 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
PTPN13-207ENST00000508063 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
PTPN13-207ENST00000508063 GAKO14976 1311 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 ENTPD3O75355 529 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 UQCRFS1P1P0C7P4 283 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 GSTO1P78417 241 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 SP3Q02447 781 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 PPATQ06203 517 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 PPIL2Q13356 520 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 TAF1CQ15572 869 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-207ENST00000508063 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 IDI2Q9BXS1 227 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
PTPN13-207ENST00000508063 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 LDHCP07864 332 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 SOX10P56693 466 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 NFIAQ12857 509 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
PTPN13-207ENST00000508063 SPATA5Q8NB90 893 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 FAM198AQ9UFP1 575 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
PTPN13-207ENST00000508063 IRF6O14896 467 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-207ENST00000508063 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
PTPN13-207ENST00000508063 BTDP43251 543 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 RGS3P49796 1198 aa13.64□□□□□ -0.23
PTPN13-207ENST00000508063 ATP8B2P98198 1209 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms