RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 AKAP2Q9Y2D5 859 aa25.82■■□□□ 1.72
CLDND1-216ENST00000507944 TFCP2Q12800 502 aa25.81■■□□□ 1.72
CLDND1-216ENST00000507944 CDC42EP5Q6NZY7 148 aa25.81■■□□□ 1.72
CLDND1-216ENST00000507944 MS4A4AQ96JQ5 239 aa25.81■■□□□ 1.72
CLDND1-216ENST00000507944 AK9Q5TCS8 1911 aa25.8■■□□□ 1.72
CLDND1-216ENST00000507944 A0A1B0GUL7 405 aa25.8■■□□□ 1.72
CLDND1-216ENST00000507944 ZKSCAN2Q63HK3 967 aa25.8■■□□□ 1.72
CLDND1-216ENST00000507944 FAM151AQ8WW52 585 aa25.8■■□□□ 1.72
CLDND1-216ENST00000507944 DCAF15Q66K64 600 aa25.79■■□□□ 1.72
CLDND1-216ENST00000507944 ZGPATQ8N5A5 531 aaKnown RBP25.79■■□□□ 1.72
CLDND1-216ENST00000507944 OTUD5Q96G74 571 aa25.79■■□□□ 1.72
CLDND1-216ENST00000507944 XAGE2Q96GT9 111 aa25.79■■□□□ 1.72
CLDND1-216ENST00000507944 WRNIP1Q96S55 665 aa25.79■■□□□ 1.72
CLDND1-216ENST00000507944 RPAP1Q9BWH6 1393 aaPredicted RBP25.79■■□□□ 1.72
CLDND1-216ENST00000507944 GTF2A2P52657 109 aa25.78■■□□□ 1.72
CLDND1-216ENST00000507944 SOX10P56693 466 aa25.78■■□□□ 1.72
CLDND1-216ENST00000507944 CRHR2Q13324 411 aa25.78■■□□□ 1.72
CLDND1-216ENST00000507944 RASGRF1Q13972 1273 aa25.78■■□□□ 1.72
CLDND1-216ENST00000507944 FBXO46Q6PJ61 603 aaPredicted RBP25.78■■□□□ 1.72
CLDND1-216ENST00000507944 USP40Q9NVE5 1235 aa25.78■■□□□ 1.72
CLDND1-216ENST00000507944 TCP10Q12799 353 aa25.77■■□□□ 1.72
CLDND1-216ENST00000507944 MVPQ14764 893 aaKnown RBP25.77■■□□□ 1.72
CLDND1-216ENST00000507944 MIGA2Q7L4E1 593 aa25.77■■□□□ 1.72
CLDND1-216ENST00000507944 TMEM57Q8N5G2 664 aa25.77■■□□□ 1.72
CLDND1-216ENST00000507944 BRI3BPQ8WY22 251 aa25.77■■□□□ 1.72
CLDND1-216ENST00000507944 ZKSCAN4Q969J2 545 aaPredicted RBP25.77■■□□□ 1.72
CLDND1-216ENST00000507944 SNCAIPQ9Y6H5 919 aa25.77■■□□□ 1.72
CLDND1-216ENST00000507944 MYH2Q9UKX2 1941 aa25.76■■□□□ 1.72
CLDND1-216ENST00000507944 CCL15-CCL14A0A0B4J2E2 113 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 PNMA6EA0A0J9YXQ4 647 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 SPDYE5A6NIY4 337 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 NFIAQ12857 509 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 CCL15Q16663 113 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 ERO1BQ86YB8 467 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 NEUROD6Q96NK8 337 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 ZNF341Q9BYN7 854 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 ABCF2Q9UG63 623 aa25.76■■□□□ 1.71
CLDND1-216ENST00000507944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.76■■□□□ 1.71
CLDND1-216ENST00000507944 PDS5AQ29RF7 1337 aaKnown RBP25.75■■□□□ 1.71
CLDND1-216ENST00000507944 G3BP1Q13283 466 aaKnown RBP eCLIP25.75■■□□□ 1.71
CLDND1-216ENST00000507944 SPTY2D1Q68D10 685 aaPredicted RBP25.74■■□□□ 1.71
CLDND1-216ENST00000507944 FAM198AQ9UFP1 575 aa25.74■■□□□ 1.71
CLDND1-216ENST00000507944 TRIM17Q9Y577 477 aa25.74■■□□□ 1.71
CLDND1-216ENST00000507944 DZIP1Q86YF9 867 aaKnown RBP25.73■■□□□ 1.71
CLDND1-216ENST00000507944 ERO1AQ96HE7 468 aa25.73■■□□□ 1.71
CLDND1-216ENST00000507944 PDE4DIPQ5VU43 2346 aa25.72■■□□□ 1.71
CLDND1-216ENST00000507944 GAKO14976 1311 aa25.72■■□□□ 1.71
CLDND1-216ENST00000507944 GORABQ5T7V8 394 aa25.72■■□□□ 1.71
CLDND1-216ENST00000507944 OTOP1Q7RTM1 612 aa25.72■■□□□ 1.71
CLDND1-216ENST00000507944 SLF2Q8IX21 1173 aa25.72■■□□□ 1.71
CLDND1-216ENST00000507944 IRF6O14896 467 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 CETPP11597 493 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 INPP5BP32019 993 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 SP3Q02447 781 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 PPIL2Q13356 520 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 TAF1CQ15572 869 aaPredicted RBP25.71■■□□□ 1.71
CLDND1-216ENST00000507944 ZFPM1Q8IX07 1006 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 FAM43AQ8N2R8 423 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 CD99L2Q8TCZ2 262 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 FAM163AQ96GL9 167 aaPredicted RBP25.71■■□□□ 1.71
CLDND1-216ENST00000507944 ZFYVE28Q9HCC9 887 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 ZNF112Q9UJU3 913 aa25.71■■□□□ 1.71
CLDND1-216ENST00000507944 SNAPC2Q13487 334 aa25.7■■□□□ 1.7
CLDND1-216ENST00000507944 ERICH6Q7L0X2 663 aa25.7■■□□□ 1.7
CLDND1-216ENST00000507944 IDI2Q9BXS1 227 aa25.7■■□□□ 1.7
CLDND1-216ENST00000507944 RGS3P49796 1198 aa25.69■■□□□ 1.7
CLDND1-216ENST00000507944 ATP8B2P98198 1209 aa25.69■■□□□ 1.7
CLDND1-216ENST00000507944 PPATQ06203 517 aa25.69■■□□□ 1.7
CLDND1-216ENST00000507944 FTSJ3Q8IY81 847 aaKnown RBP25.69■■□□□ 1.7
CLDND1-216ENST00000507944 HMG20BQ9P0W2 317 aa25.69■■□□□ 1.7
CLDND1-216ENST00000507944 ENTPD3O75355 529 aa25.68■■□□□ 1.7
CLDND1-216ENST00000507944 POLA2Q14181 598 aa25.68■■□□□ 1.7
CLDND1-216ENST00000507944 SPATA5Q8NB90 893 aa25.68■■□□□ 1.7
CLDND1-216ENST00000507944 WDHD1O75717 1129 aaPredicted RBP25.67■■□□□ 1.7
CLDND1-216ENST00000507944 BTDP43251 543 aa25.67■■□□□ 1.7
CLDND1-216ENST00000507944 MECOMQ03112 1051 aa25.67■■□□□ 1.7
CLDND1-216ENST00000507944 EFCC1Q9HA90 598 aa25.67■■□□□ 1.7
CLDND1-216ENST00000507944 BTBD19C9JJ37 291 aa25.66■■□□□ 1.7
CLDND1-216ENST00000507944 ARID4AP29374 1257 aaPredicted RBP25.66■■□□□ 1.7
CLDND1-216ENST00000507944 PI16Q6UXB8 463 aa25.66■■□□□ 1.7
CLDND1-216ENST00000507944 ITPRIPQ8IWB1 547 aa25.66■■□□□ 1.7
CLDND1-216ENST00000507944 SSH3Q8TE77 659 aa25.66■■□□□ 1.7
CLDND1-216ENST00000507944 ZCCHC17Q9NP64 241 aaKnown RBP25.66■■□□□ 1.7
CLDND1-216ENST00000507944 MROH7-TTC4A0A0A0MT08 1334 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 GPR75-ASB3A0A0A6YYF3 556 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 RLBP1P12271 317 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 NOL9Q5SY16 702 aaKnown RBP25.65■■□□□ 1.7
CLDND1-216ENST00000507944 TBC1D9Q6ZT07 1266 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 ZSCAN29Q8IWY8 852 aaPredicted RBP25.65■■□□□ 1.7
CLDND1-216ENST00000507944 C1orf115Q9H7X2 142 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 PTPN22Q9Y2R2 807 aa25.65■■□□□ 1.7
CLDND1-216ENST00000507944 ZBED9Q6R2W3 1325 aa25.64■■□□□ 1.7
CLDND1-216ENST00000507944 ZBTB7BO15156 539 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-216ENST00000507944 UQCRFS1P1P0C7P4 283 aa25.64■■□□□ 1.7
CLDND1-216ENST00000507944 CAP1Q01518 475 aa25.64■■□□□ 1.7
CLDND1-216ENST00000507944 OS9Q13438 667 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-216ENST00000507944 SH3BP5LQ7L8J4 393 aa25.64■■□□□ 1.7
CLDND1-216ENST00000507944 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.64■■□□□ 1.7
CLDND1-216ENST00000507944 ZNF384Q8TF68 577 aa25.64■■□□□ 1.7
CLDND1-216ENST00000507944 GPR108Q9NPR9 543 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms