RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CDC42EP5Q6NZY7 148 aa17.36■□□□□ 0.37
CCHCR1-222ENST00000507459 USP40Q9NVE5 1235 aa17.36■□□□□ 0.37
CCHCR1-222ENST00000507459 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 AACSQ86V21 672 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 RHPN1Q8TCX5 695 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 TEPSINQ96N21 525 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 RAI14Q9P0K7 980 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 TSKSQ9UJT2 592 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 SSC5DA1L4H1 1573 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 THSD7BQ9C0I4 1608 aa17.35■□□□□ 0.37
CCHCR1-222ENST00000507459 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 LBX1P52954 281 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 MECOMQ03112 1051 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 TCP10Q12799 353 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 LDLRAD1Q5T700 205 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
CCHCR1-222ENST00000507459 HSPA8P11142 646 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 NFIAQ12857 509 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 MAP3K11Q16584 847 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 FKBP1CQ5VVH2 108 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 FAM83AQ86UY5 434 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 KIF1BPQ96EK5 621 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 MYH2Q9UKX2 1941 aa17.33■□□□□ 0.36
CCHCR1-222ENST00000507459 GAKO14976 1311 aa17.32■□□□□ 0.36
CCHCR1-222ENST00000507459 ZAP70P43403 619 aa17.32■□□□□ 0.36
CCHCR1-222ENST00000507459 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-222ENST00000507459 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-222ENST00000507459 CSRNP1Q96S65 589 aa17.32■□□□□ 0.36
CCHCR1-222ENST00000507459 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 RAB11FIP3O75154 756 aa17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 BTDP43251 543 aa17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 GSTO1P78417 241 aa17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-222ENST00000507459 LDHCP07864 332 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 IFIT2P09913 472 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 FAM151AQ8WW52 585 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
CCHCR1-222ENST00000507459 CA12O43570 354 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 TRPA1O75762 1119 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 RGS3P49796 1198 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 ZFPM1Q8IX07 1006 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 PIH1D3Q9NQM4 214 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
CCHCR1-222ENST00000507459 AK9Q5TCS8 1911 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 GPR75-ASB3A0A0A6YYF3 556 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 PICALMQ13492 652 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 ELP3Q9H9T3 547 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 RNF186Q9NXI6 227 aa17.28■□□□□ 0.36
CCHCR1-222ENST00000507459 UNCXA6NJT0 531 aa17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 DCAF15Q66K64 600 aa17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 ZSCAN29Q8IWY8 852 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 IDI2Q9BXS1 227 aa17.27■□□□□ 0.36
CCHCR1-222ENST00000507459 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 ENTPD3O75355 529 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 IDH1O75874 414 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 RHBDL3P58872 404 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 CSADQ9Y600 493 aa17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-222ENST00000507459 SREBF2Q12772 1141 aa17.25■□□□□ 0.35
CCHCR1-222ENST00000507459 VGLL4Q14135 290 aa17.25■□□□□ 0.35
CCHCR1-222ENST00000507459 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-222ENST00000507459 OPTNQ96CV9 577 aa17.25■□□□□ 0.35
CCHCR1-222ENST00000507459 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
CCHCR1-222ENST00000507459 BAG3O95817 575 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 CYP7A1P22680 504 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 GJA5P36382 358 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 TM4SF4P48230 202 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
CCHCR1-222ENST00000507459 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms