RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PWP1Q13610 501 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 LINC00114Q6XXX2 140 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 CD163Q86VB7 1156 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 RELL1Q8IUW5 271 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 GAL3ST3Q96A11 431 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 TRIM11Q96F44 468 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 KLHDC7BQ96G42 594 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
LSM6-205ENST00000507449 CAPN10Q9HC96 672 aa5.57□□□□□ -1.52
LSM6-205ENST00000507449 DDX3YO15523 660 aaKnown RBP5.56□□□□□ -1.52
LSM6-205ENST00000507449 GREM1O60565 184 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 ADAM11O75078 769 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 SELPP16109 830 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 ARNTP27540 789 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 GSTM4Q03013 218 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 PTPN11Q06124 597 aaPredicted RBP5.56□□□□□ -1.52
LSM6-205ENST00000507449 C19orf57Q0VDD7 668 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 ZNF296Q8WUU4 475 aaPredicted RBP5.56□□□□□ -1.52
LSM6-205ENST00000507449 WNT8BQ93098 351 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 SPON2Q9BUD6 331 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 CACNA2D2Q9NY47 1150 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 KCNK4Q9NYG8 393 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 INPP5FQ9Y2H2 1132 aa5.56□□□□□ -1.52
LSM6-205ENST00000507449 FAM177BA6PVY3 158 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 GSTP1P09211 210 aaKnown RBP5.55□□□□□ -1.52
LSM6-205ENST00000507449 ITGB7P26010 798 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 CRKP46108 304 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 SEPT6Q14141 434 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 FOXD4L6Q3SYB3 417 aaPredicted RBP5.55□□□□□ -1.52
LSM6-205ENST00000507449 FOXD4L3Q6VB84 417 aaPredicted RBP5.55□□□□□ -1.52
LSM6-205ENST00000507449 BNC2Q6ZN30 1099 aaPredicted RBP5.55□□□□□ -1.52
LSM6-205ENST00000507449 KIAA0825Q8IV33 1275 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 TRIM42Q8IWZ5 723 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 RASGRP4Q8TDF6 673 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 CYP8B1Q9UNU6 501 aa5.55□□□□□ -1.52
LSM6-205ENST00000507449 FAM221AA4D161 298 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 DLGAP3O95886 979 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 AP3B2Q13367 1082 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 LRP8Q14114 963 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 LLGL2Q6P1M3 1020 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 GOLM1Q8NBJ4 401 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 FBXO27Q8NI29 283 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 SREK1Q8WXA9 508 aaKnown RBP5.54□□□□□ -1.52
LSM6-205ENST00000507449 GPRASP2Q96D09 838 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 GMLQ99445 158 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 ZC3H12CQ9C0D7 883 aaKnown RBP5.54□□□□□ -1.52
LSM6-205ENST00000507449 CCDC86Q9H6F5 360 aaKnown RBP5.54□□□□□ -1.52
LSM6-205ENST00000507449 UBP1Q9NZI7 540 aa5.54□□□□□ -1.52
LSM6-205ENST00000507449 A0A0A0MRY4 1105 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 DLL1O00548 723 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 F13A1P00488 732 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 MAOBP27338 520 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 NLRP12P59046 1061 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 SNAP47Q5SQN1 464 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
LSM6-205ENST00000507449 FAM196AQ6ZSG2 479 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 KLHL23Q8NBE8 558 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 NT5C1AQ9BXI3 368 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 CBX8Q9HC52 389 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
LSM6-205ENST00000507449 SUPT16HQ9Y5B9 1047 aaKnown RBP5.53□□□□□ -1.52
LSM6-205ENST00000507449 LOC100289279A0A1B0GTE1 492 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 ZNF862O60290 1169 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 CILPO75339 1184 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 WISP1O95388 367 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 CYP11A1P05108 521 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 ATF4P18848 351 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 CDK8P49336 464 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 ARL4DP49703 201 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 LRRC14Q15048 493 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 POU4F3Q15319 338 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 TRAPPC3LQ5T215 181 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 MAP1SQ66K74 1059 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 MCTP1Q6DN14 999 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 CCDC84Q86UT8 332 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 FBXO11Q86XK2 927 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 FMR1NBQ8N0W7 255 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 DTWD1Q8N5C7 304 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 GPBAR1Q8TDU6 330 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 UBASH3BQ8TF42 649 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 JARID2Q92833 1246 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 WDR89Q96FK6 387 aaPredicted RBP5.52□□□□□ -1.53
LSM6-205ENST00000507449 PLVAPQ9BX97 442 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 EMILIN2Q9BXX0 1053 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 LRRC3Q9BY71 257 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 MIR1-1HGQ9H1L0 117 aa5.52□□□□□ -1.53
LSM6-205ENST00000507449 TLR3O15455 904 aaKnown RBP5.51□□□□□ -1.53
LSM6-205ENST00000507449 TRIM37O94972 964 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 FGRP09769 529 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 DNAJA1P31689 397 aaKnown RBP5.51□□□□□ -1.53
LSM6-205ENST00000507449 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
LSM6-205ENST00000507449 CHRNA4P43681 627 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 FZD5Q13467 585 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 MCF2L2Q86YR7 1114 aa5.51□□□□□ -1.53
LSM6-205ENST00000507449 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms