RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-212ENST00000507355 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
POLR2J3-212ENST00000507355 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
POLR2J3-212ENST00000507355 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-212ENST00000507355 TBC1D22AQ8WUA7 517 aa16.79■□□□□ 0.28
POLR2J3-212ENST00000507355 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
POLR2J3-212ENST00000507355 IRF6O14896 467 aa16.78■□□□□ 0.28
POLR2J3-212ENST00000507355 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
POLR2J3-212ENST00000507355 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
POLR2J3-212ENST00000507355 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
POLR2J3-212ENST00000507355 CPA4Q9UI42 421 aa16.78■□□□□ 0.28
POLR2J3-212ENST00000507355 GNRH1P01148 92 aa16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 FGFR2P21802 821 aa16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
POLR2J3-212ENST00000507355 EYA2O00167 538 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 CTGFP29279 349 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 PSMC4P43686 418 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 PRMT2P55345 433 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 PPIL2Q13356 520 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 PUM3Q15397 648 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 RAET1EQ8TD07 263 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 ZCCHC17Q9NP64 241 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
POLR2J3-212ENST00000507355 FMNL1O95466 1100 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-212ENST00000507355 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-212ENST00000507355 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
POLR2J3-212ENST00000507355 BIN2Q9UBW5 565 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-212ENST00000507355 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
POLR2J3-212ENST00000507355 CCL5P13501 91 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 SLC5A1P13866 664 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 OSBPP22059 807 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 GRK4P32298 578 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 NKX2-3Q8TAU0 364 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 LPIN2Q92539 896 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
POLR2J3-212ENST00000507355 CUL9Q8IWT3 2517 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 MYPNQ86TC9 1320 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 PDHXO00330 501 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 DLL1O00548 723 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 SLC17A8Q8NDX2 589 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 HTATIP2Q9BUP3 242 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 RNF208Q9H0X6 261 aa16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-212ENST00000507355 MAST3O60307 1309 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 HOXD10P28358 340 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 INPP5BP32019 993 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 GJA8P48165 433 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 DCAF15Q66K64 600 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 SIL1Q9H173 461 aa16.72■□□□□ 0.27
POLR2J3-212ENST00000507355 GJB1P08034 283 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 PPATQ06203 517 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 ANKRD23Q86SG2 305 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 NR2E3Q9Y5X4 410 aa16.71■□□□□ 0.27
POLR2J3-212ENST00000507355 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 FARP2O94887 1054 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 PRKCZQ05513 592 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 UBE2Q1Q7Z7E8 422 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 A0A0C4DFX4 3053 aa16.7■□□□□ 0.26
POLR2J3-212ENST00000507355 MGAMO43451 1857 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 COL6A3P12111 3177 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 ZBTB7BO15156 539 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 CIAO1O76071 339 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 UBXN2AP68543 259 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 ATP2B3Q16720 1220 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 PRO3102Q9H379 93 aa16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-212ENST00000507355 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 CYP2C8P10632 490 aa16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 FCGRTP55899 365 aa16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-212ENST00000507355 PRDX5P30044 214 aa16.67■□□□□ 0.26
POLR2J3-212ENST00000507355 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms