RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 SPATA5Q8NB90 893 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 ZNF384Q8TF68 577 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
SERF1B-204ENST00000506542 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 TCP10L2B9ZVM9 353 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 MAP4K4O95819 1239 aaPredicted RBP16.77■□□□□ 0.28
SERF1B-204ENST00000506542 LDHBP07195 334 aaKnown RBP16.77■□□□□ 0.28
SERF1B-204ENST00000506542 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 TLL2Q9Y6L7 1015 aa16.77■□□□□ 0.28
SERF1B-204ENST00000506542 SEMA3EO15041 775 aa16.76■□□□□ 0.27
SERF1B-204ENST00000506542 CHMLP26374 656 aa16.76■□□□□ 0.27
SERF1B-204ENST00000506542 DEFB115Q30KQ5 88 aa16.76■□□□□ 0.27
SERF1B-204ENST00000506542 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
SERF1B-204ENST00000506542 DEFB129Q9H1M3 183 aa16.76■□□□□ 0.27
SERF1B-204ENST00000506542 GBA2Q9HCG7 927 aaPredicted RBP16.76■□□□□ 0.27
SERF1B-204ENST00000506542 SSC5DA1L4H1 1573 aa16.76■□□□□ 0.27
SERF1B-204ENST00000506542 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 BOLA2Q9H3K6 86 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
SERF1B-204ENST00000506542 DAGLAQ9Y4D2 1042 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 RASSF10A6NK89 507 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 ZAP70P43403 619 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 HUNKP57058 714 aa16.75■□□□□ 0.27
SERF1B-204ENST00000506542 SALL1Q9NSC2 1324 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 MYO1BO43795 1136 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 AOC2O75106 756 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 RASA3Q14644 834 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
SERF1B-204ENST00000506542 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
SERF1B-204ENST00000506542 UBE2Q2LH0YL09 131 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 CYP2E1P05181 493 aaPredicted RBP16.73■□□□□ 0.27
SERF1B-204ENST00000506542 MMP14P50281 582 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 MECOMQ03112 1051 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 NBPF12Q5TAG4 269 aaPredicted RBP16.73■□□□□ 0.27
SERF1B-204ENST00000506542 HAUS7Q99871 368 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 ESYT1Q9BSJ8 1104 aa16.73■□□□□ 0.27
SERF1B-204ENST00000506542 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
SERF1B-204ENST00000506542 REC8O95072 547 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 HHIPL2Q6UWX4 724 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 DZIP1Q86YF9 867 aaKnown RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 CAPNS2Q96L46 248 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 SUGT1Q9Y2Z0 365 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 MYH7P12883 1935 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 WDR33Q9C0J8 1336 aaKnown RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 HDLBPQ00341 1268 aaKnown RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 NFIAQ12857 509 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 C2orf69Q8N8R5 385 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 MAST3O60307 1309 aa16.72■□□□□ 0.27
SERF1B-204ENST00000506542 PDS5AQ29RF7 1337 aaKnown RBP16.72■□□□□ 0.27
SERF1B-204ENST00000506542 PAPPA2Q9BXP8 1791 aa16.71■□□□□ 0.27
SERF1B-204ENST00000506542 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.27
SERF1B-204ENST00000506542 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
SERF1B-204ENST00000506542 EDC3Q96F86 508 aaKnown RBP16.71■□□□□ 0.27
SERF1B-204ENST00000506542 OTOFQ9HC10 1997 aa16.71■□□□□ 0.27
SERF1B-204ENST00000506542 TCP10Q12799 353 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 ADGRA1Q86SQ6 560 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
SERF1B-204ENST00000506542 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 IPO9Q96P70 1041 aaKnown RBP16.7■□□□□ 0.26
SERF1B-204ENST00000506542 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 RFX7Q2KHR2 1363 aa16.7■□□□□ 0.26
SERF1B-204ENST00000506542 HIP1O00291 1037 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 DOCK2Q92608 1830 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 BTDP43251 543 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
SERF1B-204ENST00000506542 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
SERF1B-204ENST00000506542 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
SERF1B-204ENST00000506542 ANGEL1Q9UNK9 670 aaKnown RBP16.69■□□□□ 0.26
SERF1B-204ENST00000506542 CDK5RAP2Q96SN8 1893 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 GAKO14976 1311 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
SERF1B-204ENST00000506542 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 SGSM2O43147 1006 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
SERF1B-204ENST00000506542 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
SERF1B-204ENST00000506542 ZNF512BQ96KM6 892 aaPredicted RBP16.68■□□□□ 0.26
SERF1B-204ENST00000506542 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms