RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 VEGFBP49765 207 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 HUNKP57058 714 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 NBPF12Q5TAG4 269 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 FKBP1CQ5VVH2 108 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 SLF2Q8IX21 1173 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 C2orf69Q8N8R5 385 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
PDLIM7-216ENST00000506537 THSD7BQ9C0I4 1608 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 ATP5JP18859 108 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 NFIAQ12857 509 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 ADGRA1Q86SQ6 560 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 USP40Q9NVE5 1235 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 TMOD2Q9NZR1 351 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 FZD1Q9UP38 647 aa22.25■■□□□ 1.15
PDLIM7-216ENST00000506537 GPR75-ASB3A0A0A6YYF3 556 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 IGHDP01880 384 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 GSTO1P78417 241 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 CYP4F22Q6NT55 531 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 OTUD7AQ8TE49 926 aaPredicted RBP22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 GCC1Q96CN9 775 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 HHIPL1Q96JK4 782 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 DNAJC2Q99543 621 aaKnown RBP22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 BOLA2Q9H3K6 86 aa22.24■■□□□ 1.15
PDLIM7-216ENST00000506537 NF2P35240 595 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 TNNI2P48788 182 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 RHBDL3P58872 404 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 FKBP1BP68106 108 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 TSHZ3Q63HK5 1081 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 NAA16Q6N069 864 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 FAM83AQ86UY5 434 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 FAM198AQ9UFP1 575 aa22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 RPAP1Q9BWH6 1393 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-216ENST00000506537 GOLIM4O00461 696 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 IDH1O75874 414 aaKnown RBP22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 LDHCP07864 332 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 PRKG1Q13976 671 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 SMC5Q8IY18 1101 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 CAPNS2Q96L46 248 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 HAUS7Q99871 368 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 ECHDC1Q9NTX5 307 aa22.22■■□□□ 1.15
PDLIM7-216ENST00000506537 UBE2Q2LH0YL09 131 aa22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 WDHD1O75717 1129 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 ANKRD45Q5TZF3 282 aa22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 PAXIP1Q6ZW49 1069 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 RWDD1Q9H446 243 aaPredicted RBP22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 OTOFQ9HC10 1997 aa22.21■■□□□ 1.15
PDLIM7-216ENST00000506537 IGSF3O75054 1194 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 TCP10Q12799 353 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 TTLL12Q14166 644 aaPredicted RBP22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 SUPT20HL1Q3ZLR7 823 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 ZFPM1Q8IX07 1006 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 IDI2Q9BXS1 227 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 DDX4Q9NQI0 724 aaKnown RBP22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 PAG1Q9NWQ8 432 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 SALL3Q9BXA9 1300 aa22.2■■□□□ 1.14
PDLIM7-216ENST00000506537 RGS3P49796 1198 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 GRM1Q13255 1194 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 TTF1Q15361 905 aaPredicted RBP22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 RGMBQ6NW40 437 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 MAGEB6Q8N7X4 407 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 FAM151AQ8WW52 585 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 ANGEL1Q9UNK9 670 aaKnown RBP22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 CDK5RAP2Q96SN8 1893 aa22.19■■□□□ 1.14
PDLIM7-216ENST00000506537 CYP7A1P22680 504 aa22.18■■□□□ 1.14
PDLIM7-216ENST00000506537 MAP3K12Q12852 859 aa22.18■■□□□ 1.14
PDLIM7-216ENST00000506537 MAP3K11Q16584 847 aa22.18■■□□□ 1.14
PDLIM7-216ENST00000506537 GPATCH3Q96I76 525 aa22.18■■□□□ 1.14
PDLIM7-216ENST00000506537 AATFQ9NY61 560 aaKnown RBP eCLIP22.18■■□□□ 1.14
PDLIM7-216ENST00000506537 FAM155AB1AL88 458 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 AOC2O75106 756 aa22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 USP2O75604 605 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 ECE1P42892 770 aa22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 ARMC9Q7Z3E5 817 aa22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 SH3RF3Q8TEJ3 882 aaPredicted RBP22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 FOCADQ5VW36 1801 aa22.17■■□□□ 1.14
PDLIM7-216ENST00000506537 TTC41PQ6P2S7 1318 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 ENTPD3O75355 529 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 PDE6AP16499 860 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 ZNF157P51786 506 aaPredicted RBP22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 PPP4CP60510 307 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 PICALMQ13492 652 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 SH3BP5LQ7L8J4 393 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 RASAL3Q86YV0 1011 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 PI4K2BQ8TCG2 481 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 MYH7P12883 1935 aa22.16■■□□□ 1.14
PDLIM7-216ENST00000506537 ATRNL1Q5VV63 1379 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 TCRBV5S4A2TA0A5A2 114 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 MAP4K4O95819 1239 aaPredicted RBP22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 SLC10A3P09131 477 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 MX1P20591 662 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 DYNLL1P63167 89 aaKnown RBP22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 B4GALNT3Q6L9W6 998 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 MIGA1Q8NAN2 632 aa22.15■■□□□ 1.14
PDLIM7-216ENST00000506537 ZIC5Q96T25 663 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms