RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 IGF2BP3O00425 579 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDLIM7-215ENST00000506161 ZBTB22O15209 634 aa20.72■□□□□ 0.91
PDLIM7-215ENST00000506161 ZFPM1Q8IX07 1006 aa20.72■□□□□ 0.91
PDLIM7-215ENST00000506161 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
PDLIM7-215ENST00000506161 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
PDLIM7-215ENST00000506161 SEMA3EO15041 775 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 SLURP2P0DP57 97 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 FTSJ3Q8IY81 847 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 GNL3LQ9NVN8 582 aaKnown RBP20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 HMG20BQ9P0W2 317 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 FAM198AQ9UFP1 575 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 RFX7Q2KHR2 1363 aa20.71■□□□□ 0.91
PDLIM7-215ENST00000506161 ZSWIM8A7E2V4 1837 aa20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 IREB2P48200 963 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 VGLL4Q14135 290 aa20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 ANKRD13AQ8IZ07 590 aa20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 GAKO14976 1311 aa20.7■□□□□ 0.9
PDLIM7-215ENST00000506161 MCAMP43121 646 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 TNNI2P48788 182 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 TCP10Q12799 353 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 FAM83AQ86UY5 434 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 PTPN18Q99952 460 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 DBNDD2Q9BQY9 259 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 ABCF2Q9UG63 623 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 SIPA1L1O43166 1804 aa20.69■□□□□ 0.9
PDLIM7-215ENST00000506161 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 TNNI3KQ59H18 835 aa20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 FKBP1CQ5VVH2 108 aa20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 ZNF296Q8WUU4 475 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 OPTNQ96CV9 577 aa20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 SNCAIPQ9Y6H5 919 aa20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 FPGT-TNNI3KV9GXZ4 949 aa20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
PDLIM7-215ENST00000506161 PHIPQ8WWQ0 1821 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 SURF6O75683 361 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 ZBTB48P10074 688 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 MIGA2Q7L4E1 593 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 IFNL1Q8IU54 200 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 ZKSCAN4Q969J2 545 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 MS4A4AQ96JQ5 239 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 DDX4Q9NQI0 724 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 USP40Q9NVE5 1235 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 ATRNL1Q5VV63 1379 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 FOCADQ5VW36 1801 aa20.67■□□□□ 0.9
PDLIM7-215ENST00000506161 MAP3K9P80192 1104 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 CAP1Q01518 475 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 MECOMQ03112 1051 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 C20orf194Q5TEA3 1177 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 SH3BP5LQ7L8J4 393 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 NOP58Q9Y2X3 529 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-215ENST00000506161 PTPRFP10586 1907 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 GPR25O00155 361 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 INPP5BP32019 993 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 HABP4Q5JVS0 413 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 SPATA5Q8NB90 893 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 SNRKQ9NRH2 765 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 TMOD2Q9NZR1 351 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
PDLIM7-215ENST00000506161 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 WDHD1O75717 1129 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 EAF2Q96CJ1 260 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 WRNIP1Q96S55 665 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 CFHR5Q9BXR6 569 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 EXOC6BQ9Y2D4 811 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 DOCK1Q14185 1865 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
PDLIM7-215ENST00000506161 MROH7-TTC4A0A0A0MT08 1334 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 TESPA1A2RU30 521 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 BTDP43251 543 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 RGS3P49796 1198 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 RHBDL3P58872 404 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 FBXO46Q6PJ61 603 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 DZIP1Q86YF9 867 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 BRI3BPQ8WY22 251 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 NSUN4Q96CB9 384 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 GPR108Q9NPR9 543 aa20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-215ENST00000506161 FAM163AQ96GL9 167 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-215ENST00000506161 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
PDLIM7-215ENST00000506161 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
PDLIM7-215ENST00000506161 DDTLA6NHG4 134 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 SPDYE5A6NIY4 337 aa20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 OS9Q13438 667 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-215ENST00000506161 GORABQ5T7V8 394 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms