RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 MAP3K9P80192 1104 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 TNFAIP1Q13829 316 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 CCL15Q16663 113 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 METTL24Q5JXM2 366 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 ZKSCAN4Q969J2 545 aaPredicted RBP7.37□□□□□ -1.23
GYPB-205ENST00000505583 EFCC1Q9HA90 598 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 PTCH2Q9Y6C5 1203 aa7.37□□□□□ -1.23
GYPB-205ENST00000505583 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
GYPB-205ENST00000505583 ZNF316A6NFI3 1004 aaPredicted RBP7.36□□□□□ -1.23
GYPB-205ENST00000505583 SPDYE5A6NIY4 337 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 IRF6O14896 467 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 MYCP01106 439 aaPredicted RBP7.36□□□□□ -1.23
GYPB-205ENST00000505583 CTGFP29279 349 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
GYPB-205ENST00000505583 EVX2Q03828 476 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 TAF1CQ15572 869 aaPredicted RBP7.36□□□□□ -1.23
GYPB-205ENST00000505583 OTUD7BQ6GQQ9 843 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 MIGA2Q7L4E1 593 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 ATG9AQ7Z3C6 839 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 HS6ST3Q8IZP7 471 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 TEKT1Q969V4 418 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 ZDHHC15Q96MV8 337 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 PCDH10Q9P2E7 1040 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 AK9Q5TCS8 1911 aa7.36□□□□□ -1.23
GYPB-205ENST00000505583 KIAA0100Q14667 2235 aaKnown RBP7.35□□□□□ -1.23
GYPB-205ENST00000505583 BTBD19C9JJ37 291 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 RIOK3O14730 519 aaKnown RBP7.35□□□□□ -1.23
GYPB-205ENST00000505583 FRAT2O75474 233 aaPredicted RBP7.35□□□□□ -1.23
GYPB-205ENST00000505583 INPP5BP32019 993 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 TNNI2P48788 182 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 GTF2A2P52657 109 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 NFIAQ12857 509 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 DIXDC1Q155Q3 683 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 CAVIN4Q5BKX8 364 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
GYPB-205ENST00000505583 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 ZFPM1Q8IX07 1006 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 TBC1D22AQ8WUA7 517 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 ZNF333Q96JL9 665 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 WRNIP1Q96S55 665 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 CSADQ9Y600 493 aa7.35□□□□□ -1.23
GYPB-205ENST00000505583 MGAMO43451 1857 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 PTPRCP08575 1304 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 EYA2O00167 538 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 TLR2O60603 784 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 PYGBP11216 843 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 CHRM1P11229 460 aaPredicted RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 PRDX5P30044 214 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 TCP10Q12799 353 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 MOGSQ13724 837 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 HABP4Q5JVS0 413 aaKnown RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 FKBP1CQ5VVH2 108 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 CDC42EP5Q6NZY7 148 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 HHIPL2Q6UWX4 724 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 ERO1BQ86YB8 467 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 SH3TC2Q8TF17 1288 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 MRIQ9BWK5 157 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 FARP1Q9Y4F1 1045 aaPredicted RBP7.34□□□□□ -1.23
GYPB-205ENST00000505583 MYH2Q9UKX2 1941 aa7.34□□□□□ -1.23
GYPB-205ENST00000505583 PHIPQ8WWQ0 1821 aa7.34□□□□□ -1.24
GYPB-205ENST00000505583 RPAP1Q9BWH6 1393 aaPredicted RBP7.33□□□□□ -1.24
GYPB-205ENST00000505583 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 PTPRFP10586 1907 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 HAX1O00165 279 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
GYPB-205ENST00000505583 CETPP11597 493 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 PPIL2Q13356 520 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 SNAPC2Q13487 334 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 SLC9C1Q4G0N8 1177 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 LPIN2Q92539 896 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 SIL1Q9H173 461 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 TMOD2Q9NZR1 351 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 FAM198AQ9UFP1 575 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 CPA4Q9UI42 421 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 ZNF112Q9UJU3 913 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.33□□□□□ -1.24
GYPB-205ENST00000505583 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
GYPB-205ENST00000505583 C19orf67A6NJJ6 358 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 SLC5A1P13866 664 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 ADORA1P30542 326 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 PHKA1P46020 1223 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 PPATQ06203 517 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 MTFR1Q15390 333 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 SH3BP5LQ7L8J4 393 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 FAM151AQ8WW52 585 aa7.32□□□□□ -1.24
GYPB-205ENST00000505583 TRIM47Q96LD4 638 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms