RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 GYG1P46976 350 aa22.74■■□□□ 1.23
SDHA-206ENST00000505555 ZNF165P49910 485 aa22.74■■□□□ 1.23
SDHA-206ENST00000505555 C17orf53Q8N3J3 647 aaPredicted RBP22.74■■□□□ 1.23
SDHA-206ENST00000505555 LINC00301Q8NCQ3 95 aa22.74■■□□□ 1.23
SDHA-206ENST00000505555 LTBP4Q8N2S1 1624 aa22.74■■□□□ 1.23
SDHA-206ENST00000505555 RREB1Q92766 1687 aa22.74■■□□□ 1.23
SDHA-206ENST00000505555 ERCC4Q92889 916 aaPredicted RBP22.74■■□□□ 1.23
SDHA-206ENST00000505555 FAM160A1Q05DH4 1040 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 STK38Q15208 465 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
SDHA-206ENST00000505555 MYSM1Q5VVJ2 828 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 TMEM87BQ96K49 555 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 ALG1Q9BT22 464 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 A0A1B0GVL5 298 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 ZBTB43O43298 467 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 KINO60870 393 aaKnown RBP22.73■■□□□ 1.23
SDHA-206ENST00000505555 TDO2P48775 406 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
SDHA-206ENST00000505555 SF3A1Q15459 793 aaKnown RBP22.73■■□□□ 1.23
SDHA-206ENST00000505555 ADGRA1Q86SQ6 560 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 CDC5LQ99459 802 aaKnown RBP22.73■■□□□ 1.23
SDHA-206ENST00000505555 ABCF2Q9UG63 623 aa22.73■■□□□ 1.23
SDHA-206ENST00000505555 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 IFIT3O14879 490 aaKnown RBP22.72■■□□□ 1.23
SDHA-206ENST00000505555 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 TOMM22Q9NS69 142 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 AKNAD1Q5T1N1 836 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 CLEC4GQ6UXB4 293 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
SDHA-206ENST00000505555 FAM217BQ9NTX9 383 aaPredicted RBP22.72■■□□□ 1.23
SDHA-206ENST00000505555 C4AP0C0L4 1744 aa22.71■■□□□ 1.23
SDHA-206ENST00000505555 C4BP0C0L5 1744 aa22.71■■□□□ 1.23
SDHA-206ENST00000505555 ADALQ6DHV7 355 aa22.71■■□□□ 1.23
SDHA-206ENST00000505555 MFSD6Q6ZSS7 791 aa22.71■■□□□ 1.23
SDHA-206ENST00000505555 C11orf57Q6ZUT1 292 aaPredicted RBP22.71■■□□□ 1.23
SDHA-206ENST00000505555 BRAPQ7Z569 592 aa22.71■■□□□ 1.23
SDHA-206ENST00000505555 MRPS27Q92552 414 aaKnown RBP22.71■■□□□ 1.23
SDHA-206ENST00000505555 GOLGA8AA7E2F4 631 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 CYP7A1P22680 504 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 NDUFA8P51970 172 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 SYNE3Q6ZMZ3 975 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 C8orf37Q96NL8 207 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 POLR3EQ9NVU0 708 aa22.7■■□□□ 1.23
SDHA-206ENST00000505555 CTAGE5O15320 804 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 RANBP6O60518 1105 aaKnown RBP22.7■■□□□ 1.22
SDHA-206ENST00000505555 NTRK3Q16288 839 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 TBC1D9BQ66K14 1250 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 FMR1NBQ8N0W7 255 aaPredicted RBP22.7■■□□□ 1.22
SDHA-206ENST00000505555 TDRD7Q8NHU6 1098 aaKnown RBP22.7■■□□□ 1.22
SDHA-206ENST00000505555 NACAP1Q9BZK3 213 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 KCNF1Q9H3M0 494 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 DOCK2Q92608 1830 aa22.7■■□□□ 1.22
SDHA-206ENST00000505555 SPTLC2O15270 562 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 CDKL5O76039 1030 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
SDHA-206ENST00000505555 KRT40Q6A162 431 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 SLC12A7Q9Y666 1083 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 BCL9LQ86UU0 1499 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 SDR42E1Q8WUS8 393 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 CELF1Q92879 486 aaKnown RBP22.69■■□□□ 1.22
SDHA-206ENST00000505555 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 RAI14Q9P0K7 980 aa22.69■■□□□ 1.22
SDHA-206ENST00000505555 CCDC69A6NI79 296 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 SMIM22K7EJ46 135 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 GNAT2P19087 354 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 IARSP41252 1262 aaKnown RBP22.68■■□□□ 1.22
SDHA-206ENST00000505555 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
SDHA-206ENST00000505555 ANO1Q5XXA6 986 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 CPLX2Q6PUV4 134 aaKnown RBP22.68■■□□□ 1.22
SDHA-206ENST00000505555 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 KCNG4Q8TDN1 519 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 PIBF1Q8WXW3 757 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 TRIM5Q9C035 493 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 CNNM2Q9H8M5 875 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 MINPP1Q9UNW1 487 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 TAF1P21675 1872 aa22.68■■□□□ 1.22
SDHA-206ENST00000505555 YEATS4O95619 227 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 LIFRP42702 1097 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 NGLY1Q96IV0 654 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 KRT23Q9C075 422 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 BCL2L12Q9HB09 334 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 A0A1W2PQ27 194 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 A0A1W2PQ64 194 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 A0A1W2PQD8 194 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 NOLC1Q14978 699 aaKnown RBP eCLIP22.67■■□□□ 1.223e-6■□□□□ 10.3
SDHA-206ENST00000505555 IQCB1Q15051 598 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 VPS37DQ86XT2 251 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 SDF4Q9BRK5 362 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 SLC26A6Q9BXS9 759 aa22.67■■□□□ 1.22
SDHA-206ENST00000505555 BSDC1Q9NW68 430 aaPredicted RBP22.67■■□□□ 1.22
SDHA-206ENST00000505555 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
SDHA-206ENST00000505555 RRP9O43818 475 aaKnown RBP22.66■■□□□ 1.22
SDHA-206ENST00000505555 MARCKSP29966 332 aaPredicted RBP22.66■■□□□ 1.22
SDHA-206ENST00000505555 STX1AQ16623 288 aa22.66■■□□□ 1.22
SDHA-206ENST00000505555 STAG1Q8WVM7 1258 aa22.66■■□□□ 1.22
SDHA-206ENST00000505555 ZNF804BA4D1E1 1349 aa22.66■■□□□ 1.22
SDHA-206ENST00000505555 MINDY4BA8MYZ0 360 aa22.66■■□□□ 1.22
SDHA-206ENST00000505555 ZNF75DP51815 510 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms