RNA–Protein interactions for RNA: ENST00000505454.1

AC116563.1-201, humanhuman

TSL 3 BASIC

Gene AC116563.1, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116563.1-201ENST00000505454 CCDC87Q9NVE4 849 aa4.53□□□□□ -1.68
AC116563.1-201ENST00000505454 PPP1R9AQ9ULJ8 1098 aa4.53□□□□□ -1.68
AC116563.1-201ENST00000505454 FAM13AO94988 1023 aa4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 RNASE1P07998 156 aaKnown RBP4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 CD96P40200 585 aa4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 CDK5R2Q13319 367 aa4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 GLIS3Q8NEA6 775 aa4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 MISP3Q96FF7 219 aa4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 TRIM56Q9BRZ2 755 aaKnown RBP4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 GSX1Q9H4S2 264 aaPredicted RBP4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 MBNL3Q9NUK0 354 aaKnown RBP4.52□□□□□ -1.69
AC116563.1-201ENST00000505454 FAM87AP0C7U9 286 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 NPR3P17342 541 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 LIG1P18858 919 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 FUT4P22083 530 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 SSFA2P28290 1259 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 GALNT12Q8IXK2 581 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 TMEM40Q8WWA1 233 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 WDR18Q9BV38 432 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 ZC3H12CQ9C0D7 883 aaKnown RBP4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 ANO2Q9NQ90 1003 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 ADAMTS6Q9UKP5 1117 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 VAV3Q9UKW4 847 aa4.51□□□□□ -1.69
AC116563.1-201ENST00000505454 B3GALT4O96024 378 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 FKBP4Q02790 459 aaKnown RBP eCLIP4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 AOC3Q16853 763 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 USPL1Q5W0Q7 1092 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 SPOCD1Q6ZMY3 1216 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 GJD3Q8N144 294 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 LRRN4CLQ8ND94 238 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 CCDC97Q96F63 343 aaPredicted RBP4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 WDR89Q96FK6 387 aaPredicted RBP4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 SLC38A3Q99624 504 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 PIDD1Q9HB75 910 aa4.5□□□□□ -1.69
AC116563.1-201ENST00000505454 RNGTTO60942 597 aaKnown RBP4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 ABL1P00519 1130 aa4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 SLFN14P0C7P3 912 aa4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 ZNF157P51786 506 aaPredicted RBP4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 PRKCQQ04759 706 aa4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 ARHGAP27Q6ZUM4 889 aa4.49□□□□□ -1.69
AC116563.1-201ENST00000505454 TMPRSS2O15393 492 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 LEFTY1O75610 366 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 SF3B2Q13435 895 aaKnown RBP4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 KIAA0319Q5VV43 1072 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 SMYD4Q8IYR2 804 aaPredicted RBP4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 FANCD2OSQ96PS1 177 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 EHD4Q9H223 541 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 ZNF576Q9H609 170 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 CCDC86Q9H6F5 360 aaKnown RBP4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 CRIM1Q9NZV1 1036 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 SERPINA10Q9UK55 444 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 U3KQE9 123 aa4.48□□□□□ -1.69
AC116563.1-201ENST00000505454 LRRC10BA6NIK2 292 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 ITPKAP23677 461 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 ID3Q02535 119 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 MESP2Q0VG99 397 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 AP3B2Q13367 1082 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 IFI16Q16666 785 aaKnown RBP4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 FAM84AQ96KN4 292 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 HRASLS5Q96KN8 279 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 ATXN3LQ9H3M9 355 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 PRDM7Q9NQW5 492 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 DISC1Q9NRI5 854 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 TIMELESSQ9UNS1 1208 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 PLAGL2Q9UPG8 496 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 MTMR7Q9Y216 660 aa4.47□□□□□ -1.69
AC116563.1-201ENST00000505454 SYNGAP1Q96PV0 1343 aa4.46□□□□□ -1.69
AC116563.1-201ENST00000505454 TMEM265A0A087WTH1 108 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 ZNF862O60290 1169 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 ZNF865P0CJ78 1059 aaPredicted RBP4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 HCLS1P14317 486 aaPredicted RBP4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 OXCT1P55809 520 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 ZNF211Q13398 564 aaPredicted RBP4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 TTLL4Q14679 1199 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 MLANAQ16655 118 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 DUSP23Q9BVJ7 150 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 SSU72Q9NP77 194 aaKnown RBP4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 PCOLCE2Q9UKZ9 415 aa4.46□□□□□ -1.7
AC116563.1-201ENST00000505454 TMEM88BA6NKF7 163 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 NEFLP07196 543 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 ITIH2P19823 946 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 ANGEL2Q5VTE6 544 aaKnown RBP4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 SLC23A3Q6PIS1 610 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 MKNK2Q9HBH9 465 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 NPHS2Q9NP85 383 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 BRPF3Q9ULD4 1205 aa4.45□□□□□ -1.7
AC116563.1-201ENST00000505454 TMEM238LA0A1B0GVL6 79 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 CARNS1A5YM72 827 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 CEACAM5P06731 702 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 ORC1Q13415 861 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 KCNMB1Q16558 191 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 PHLDB3Q6NSJ2 640 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 C14orf37Q86TY3 774 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 ZSWIM9Q86XI8 627 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 TOP6BLQ8N6T0 577 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 KCNB2Q92953 911 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 FAM53CQ9NYF3 392 aa4.44□□□□□ -1.7
AC116563.1-201ENST00000505454 ZNF503-AS2A6NEH8 195 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms