RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MIGA2Q7L4E1 593 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 TRIM47Q96LD4 638 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 HTATIP2Q9BUP3 242 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 SRRDQ9UH36 339 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 HTTP42858 3142 aa8.71□□□□□ -1.02
NPIPB3-203ENST00000504841 VAMP4O75379 141 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 GNRH1P01148 92 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 CCL5P13501 91 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 HOXD10P28358 340 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 PRKCZQ05513 592 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 TCP10Q12799 353 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 CAVIN4Q5BKX8 364 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 NKX2-3Q8TAU0 364 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 TBC1D22AQ8WUA7 517 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 SUCLG2Q96I99 432 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 ZNF341Q9BYN7 854 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 RNF208Q9H0X6 261 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 ZCCHC17Q9NP64 241 aaKnown RBP8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 RIPOR2Q9Y4F9 1068 aa8.7□□□□□ -1.02
NPIPB3-203ENST00000504841 DLL1O00548 723 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 FARP2O94887 1054 aaPredicted RBP8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 GJB1P08034 283 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 GJA8P48165 433 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 FXR2P51116 673 aaKnown RBP eCLIP8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 UBXN2AP68543 259 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 PPATQ06203 517 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 ANKRD23Q86SG2 305 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 FAM83AQ86UY5 434 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 TAOK2Q9UL54 1235 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 IL16Q14005 1332 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 MROH5Q6ZUA9 1318 aa8.69□□□□□ -1.02
NPIPB3-203ENST00000504841 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 CYP2C8P10632 490 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 ZEB1P37275 1124 aaPredicted RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 BCAMP50895 628 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 FCGRTP55899 365 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 APOBEC3HQ6NTF7 200 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 U2AF1L4Q8WU68 220 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 PARK7Q99497 189 aaKnown RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 MAST3O60307 1309 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 RPAP1Q9BWH6 1393 aaPredicted RBP8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 CEP290O15078 2479 aa8.68□□□□□ -1.02
NPIPB3-203ENST00000504841 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 EVI5O60447 810 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 ALDH1L1O75891 902 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 NBPF7P0C2Y1 421 aaPredicted RBP8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 ELNP15502 786 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 KAZALD1Q96I82 304 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 ADGRA2Q96PE1 1338 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 GABRQQ9UN88 632 aa8.67□□□□□ -1.02
NPIPB3-203ENST00000504841 SOX1O00570 391 aaPredicted RBP8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 ADCY3O60266 1144 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 PDE8BO95263 885 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 INHAP05111 366 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 IFIT1P09914 478 aaKnown RBP8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 NFIAQ12857 509 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 FAM151AQ8WW52 585 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 DEFB118Q96PH6 123 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 KCNH4Q9UQ05 1017 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 DAGLAQ9Y4D2 1042 aa8.66□□□□□ -1.02
NPIPB3-203ENST00000504841 TNPO2O14787 897 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 SGPL1O95470 568 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 TFRCP02786 760 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 BCRP11274 1271 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 PRDX5P30044 214 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 FLT3LGP49771 235 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 MOGSQ13724 837 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 PUM3Q15397 648 aaKnown RBP8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 CDC42EP5Q6NZY7 148 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 UBE2Q1Q7Z7E8 422 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 VGLL2Q8N8G2 317 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 SMCR8Q8TEV9 937 aaPredicted RBP8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 PRO3102Q9H379 93 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 PICK1Q9NRD5 415 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms