RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
RNF4-206ENST00000504782 FAM83AQ86UY5 434 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 ZKSCAN4Q969J2 545 aaPredicted RBP15.88■□□□□ 0.13
RNF4-206ENST00000504782 XAGE2Q96GT9 111 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 TMOD2Q9NZR1 351 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 DENND2AQ9ULE3 1009 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 SNCAIPQ9Y6H5 919 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 SALL1Q9NSC2 1324 aa15.88■□□□□ 0.13
RNF4-206ENST00000504782 ALDH1A1P00352 501 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 GNAI2P04899 355 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
RNF4-206ENST00000504782 FKBP1CQ5VVH2 108 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 BRI3BPQ8WY22 251 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 GNL3LQ9NVN8 582 aaKnown RBP15.87■□□□□ 0.13
RNF4-206ENST00000504782 FAM198AQ9UFP1 575 aa15.87■□□□□ 0.13
RNF4-206ENST00000504782 RLBP1P12271 317 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 ZKSCAN2Q63HK3 967 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 PI16Q6UXB8 463 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 WRNIP1Q96S55 665 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 USP40Q9NVE5 1235 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 ZSWIM8A7E2V4 1837 aa15.86■□□□□ 0.13
RNF4-206ENST00000504782 SEMA3EO15041 775 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 SLURP2P0DP57 97 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 INPP5BP32019 993 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 FAM151AQ8WW52 585 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 NEUROD6Q96NK8 337 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 CSADQ9Y600 493 aa15.85■□□□□ 0.13
RNF4-206ENST00000504782 RPAP1Q9BWH6 1393 aaPredicted RBP15.85■□□□□ 0.13
RNF4-206ENST00000504782 DOCK2Q92608 1830 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 CCL15-CCL14A0A0B4J2E2 113 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 SPDYE5A6NIY4 337 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 CCL15Q16663 113 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 FAM43AQ8N2R8 423 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 ABCF2Q9UG63 623 aa15.84■□□□□ 0.13
RNF4-206ENST00000504782 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
RNF4-206ENST00000504782 PKN2Q16513 984 aaKnown RBP15.83■□□□□ 0.12
RNF4-206ENST00000504782 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 SH3BP5LQ7L8J4 393 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 HMG20BQ9P0W2 317 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 AKAP2Q9Y2D5 859 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 TRIM17Q9Y577 477 aa15.83■□□□□ 0.12
RNF4-206ENST00000504782 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
RNF4-206ENST00000504782 IRF6O14896 467 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 ZBTB22O15209 634 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 RGS3P49796 1198 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 GTF2A2P52657 109 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 POLA2Q14181 598 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 FBXO46Q6PJ61 603 aaPredicted RBP15.82■□□□□ 0.12
RNF4-206ENST00000504782 ERO1BQ86YB8 467 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 ZNF341Q9BYN7 854 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 DDX4Q9NQI0 724 aaKnown RBP15.82■□□□□ 0.12
RNF4-206ENST00000504782 GAKO14976 1311 aa15.82■□□□□ 0.12
RNF4-206ENST00000504782 MECOMQ03112 1051 aa15.81■□□□□ 0.12
RNF4-206ENST00000504782 G3BP1Q13283 466 aaKnown RBP eCLIP15.81■□□□□ 0.12
RNF4-206ENST00000504782 MVPQ14764 893 aaKnown RBP15.81■□□□□ 0.12
RNF4-206ENST00000504782 PDS5AQ29RF7 1337 aaKnown RBP15.81■□□□□ 0.12
RNF4-206ENST00000504782 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
RNF4-206ENST00000504782 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
RNF4-206ENST00000504782 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
RNF4-206ENST00000504782 DZIP1Q86YF9 867 aaKnown RBP15.81■□□□□ 0.12
RNF4-206ENST00000504782 ZNF112Q9UJU3 913 aa15.81■□□□□ 0.12
RNF4-206ENST00000504782 ATRNL1Q5VV63 1379 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 DDTLA6NHG4 134 aaPredicted RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 ZBTB7BO15156 539 aaPredicted RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 WDHD1O75717 1129 aaPredicted RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 MCAMP43121 646 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 BTDP43251 543 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 ATP8B2P98198 1209 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 TAF1CQ15572 869 aaPredicted RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 ZGPATQ8N5A5 531 aaKnown RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
RNF4-206ENST00000504782 SPATA5Q8NB90 893 aa15.8■□□□□ 0.12
RNF4-206ENST00000504782 MROH7-TTC4A0A0A0MT08 1334 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
RNF4-206ENST00000504782 SP3Q02447 781 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 PPIL2Q13356 520 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 ERICH6Q7L0X2 663 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 ITPRIPQ8IWB1 547 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 SSH3Q8TE77 659 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 HOOK2Q96ED9 719 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 FAM163AQ96GL9 167 aaPredicted RBP15.79■□□□□ 0.12
RNF4-206ENST00000504782 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 SNRKQ9NRH2 765 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 PHIPQ8WWQ0 1821 aa15.79■□□□□ 0.12
RNF4-206ENST00000504782 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 CETPP11597 493 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 RHBDL3P58872 404 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 PICALMQ13492 652 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 GORABQ5T7V8 394 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
RNF4-206ENST00000504782 PANK1Q8TE04 598 aa15.78■□□□□ 0.12
RNF4-206ENST00000504782 NSUN4Q96CB9 384 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms