RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
NEDD9-209ENST00000504634 LPIN2Q92539 896 aa15.15■□□□□ 0.02
NEDD9-209ENST00000504634 BRCA2P51587 3418 aa15.15■□□□□ 0.02
NEDD9-209ENST00000504634 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
NEDD9-209ENST00000504634 EYA2O00167 538 aa15.14■□□□□ 0.01
NEDD9-209ENST00000504634 INPP5BP32019 993 aa15.14■□□□□ 0.01
NEDD9-209ENST00000504634 TCP10Q12799 353 aa15.14■□□□□ 0.01
NEDD9-209ENST00000504634 USP44Q9H0E7 712 aa15.14■□□□□ 0.01
NEDD9-209ENST00000504634 CPA4Q9UI42 421 aa15.14■□□□□ 0.01
NEDD9-209ENST00000504634 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
NEDD9-209ENST00000504634 FGFR2P21802 821 aa15.13■□□□□ 0.01
NEDD9-209ENST00000504634 HOXD10P28358 340 aa15.13■□□□□ 0.01
NEDD9-209ENST00000504634 ANKRD23Q86SG2 305 aa15.13■□□□□ 0.01
NEDD9-209ENST00000504634 FAM151AQ8WW52 585 aa15.13■□□□□ 0.01
NEDD9-209ENST00000504634 GNL3LQ9NVN8 582 aaKnown RBP15.13■□□□□ 0.01
NEDD9-209ENST00000504634 KIAA0100Q14667 2235 aaKnown RBP15.13■□□□□ 0.01
NEDD9-209ENST00000504634 OTOFQ9HC10 1997 aa15.13■□□□□ 0.01
NEDD9-209ENST00000504634 LAMB1P07942 1786 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 PDHXO00330 501 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
NEDD9-209ENST00000504634 PSMC4P43686 418 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 CDC42EP5Q6NZY7 148 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 C17orf99Q6UX52 265 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 RAET1EQ8TD07 263 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 SSH1Q8WYL5 1049 aa15.12■□□□□ 0.01
NEDD9-209ENST00000504634 LDHBP07195 334 aaKnown RBP15.11■□□□□ 0.01
NEDD9-209ENST00000504634 NFIAQ12857 509 aa15.11■□□□□ 0.01
NEDD9-209ENST00000504634 SIL1Q9H173 461 aa15.11■□□□□ 0.01
NEDD9-209ENST00000504634 USP40Q9NVE5 1235 aa15.11■□□□□ 0.01
NEDD9-209ENST00000504634 SRRDQ9UH36 339 aa15.11■□□□□ 0.01
NEDD9-209ENST00000504634 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
NEDD9-209ENST00000504634 DAGLAQ9Y4D2 1042 aa15.11■□□□□ 0.01
NEDD9-209ENST00000504634 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 E9PSI1 815 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 PRDX5P30044 214 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 RFX5P48382 616 aaPredicted RBP15.1■□□□□ 0.01
NEDD9-209ENST00000504634 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
NEDD9-209ENST00000504634 ATP2B3Q16720 1220 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 TRIM47Q96LD4 638 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
NEDD9-209ENST00000504634 CEP126Q9P2H0 1117 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
NEDD9-209ENST00000504634 ZNF112Q9UJU3 913 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 KCNH4Q9UQ05 1017 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 ZNF521Q96K83 1311 aa15.1■□□□□ 0.01
NEDD9-209ENST00000504634 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
NEDD9-209ENST00000504634 H0YGN5 161 aa15.09■□□□□ 0.01
NEDD9-209ENST00000504634 OSBPP22059 807 aa15.09■□□□□ 0.01
NEDD9-209ENST00000504634 MTFR1Q15390 333 aa15.09■□□□□ 0.01
NEDD9-209ENST00000504634 DPF3Q92784 378 aa15.09■□□□□ 0.01
NEDD9-209ENST00000504634 MYPNQ86TC9 1320 aa15.09■□□□□ 0.01
NEDD9-209ENST00000504634 CXCL11O14625 94 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 UBTFL1P0CB47 393 aaPredicted RBP15.08■□□□□ 0
NEDD9-209ENST00000504634 CTGFP29279 349 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 GRK4P32298 578 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 FCGRTP55899 365 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
NEDD9-209ENST00000504634 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 ZSCAN29Q8IWY8 852 aaPredicted RBP15.08■□□□□ 0
NEDD9-209ENST00000504634 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 PICK1Q9NRD5 415 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 FAM198AQ9UFP1 575 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
NEDD9-209ENST00000504634 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0
NEDD9-209ENST00000504634 UBXN2AP68543 259 aa15.07■□□□□ 0
NEDD9-209ENST00000504634 FBXO3Q9UK99 471 aa15.07■□□□□ 0
NEDD9-209ENST00000504634 ZHX2Q9Y6X8 837 aa15.07■□□□□ 0
NEDD9-209ENST00000504634 SEMA3EO15041 775 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 CIAO1O76071 339 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 CYP2C8P10632 490 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 RGS3P49796 1198 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 PRKCZQ05513 592 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 FASTKD5Q7L8L6 764 aaKnown RBP15.06■□□□□ 0
NEDD9-209ENST00000504634 DZIP1Q86YF9 867 aaKnown RBP15.06■□□□□ 0
NEDD9-209ENST00000504634 ZFPM1Q8IX07 1006 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
NEDD9-209ENST00000504634 RNF208Q9H0X6 261 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
NEDD9-209ENST00000504634 ADGRA2Q96PE1 1338 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 SALL1Q9NSC2 1324 aa15.06■□□□□ 0
NEDD9-209ENST00000504634 ENTPD3O75355 529 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 GJB1P08034 283 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 CCL5P13501 91 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 IL15P40933 162 aaPredicted RBP15.05■□□□□ -0
NEDD9-209ENST00000504634 PHKA1P46020 1223 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 MOGSQ13724 837 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 GPAT2Q6NUI2 795 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 GADL1Q6ZQY3 521 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 SCYL3Q8IZE3 742 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 SHISA4Q96DD7 197 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 HTATIP2Q9BUP3 242 aa15.05■□□□□ -0
NEDD9-209ENST00000504634 BCRP11274 1271 aa15.04■□□□□ -0
NEDD9-209ENST00000504634 GJA8P48165 433 aa15.04■□□□□ -0
NEDD9-209ENST00000504634 SLF2Q8IX21 1173 aa15.04■□□□□ -0
NEDD9-209ENST00000504634 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms