RNA–Protein interactions for RNA: ENST00000504616.1

AP003478.1-201, humanhuman

BASIC

Gene AP003478.1, Length 833 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003478.1-201ENST00000504616 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
AP003478.1-201ENST00000504616 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
AP003478.1-201ENST00000504616 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 TCP10Q12799 353 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 HOOK2Q96ED9 719 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 CSADQ9Y600 493 aa12.88□□□□□ -0.35
AP003478.1-201ENST00000504616 MAST2Q6P0Q8 1798 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 TBC1D8O95759 1140 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 TM4SF4P48230 202 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 DGKZQ13574 1117 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 TTC39AQ5SRH9 613 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
AP003478.1-201ENST00000504616 ZBTB22O15209 634 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 NFIAQ12857 509 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 VGLL4Q14135 290 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 DCAF15Q66K64 600 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 WRNIP1Q96S55 665 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 DBNDD2Q9BQY9 259 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 DDX19BQ9UMR2 479 aa12.86□□□□□ -0.35
AP003478.1-201ENST00000504616 MCAMP43121 646 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 BTDP43251 543 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 MECOMQ03112 1051 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 MIGA2Q7L4E1 593 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 MCOLN1Q9GZU1 580 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 EXOC6BQ9Y2D4 811 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 NOP58Q9Y2X3 529 aaKnown RBP12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 MROH7-TTC4A0A0A0MT08 1334 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 GAKO14976 1311 aa12.85□□□□□ -0.35
AP003478.1-201ENST00000504616 ALDH1A1P00352 501 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 GJA5P36382 358 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 INHBEP58166 350 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 GSTO1P78417 241 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 MYO5AQ9Y4I1 1855 aaKnown RBP12.84□□□□□ -0.35
AP003478.1-201ENST00000504616 CCDC85CA6NKD9 419 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 RGS3P49796 1198 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 PICALMQ13492 652 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 ZKSCAN4Q969J2 545 aaPredicted RBP12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 BCL11AQ9H165 835 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 DBNLQ9UJU6 430 aaKnown RBP12.83□□□□□ -0.36
AP003478.1-201ENST00000504616 GPR25O00155 361 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 APBB1O00213 710 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 IGF2BP3O00425 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 HMMRO75330 724 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 LDHCP07864 332 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 HSP90AB4PQ58FF6 505 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 NOL10Q9BSC4 688 aaKnown RBP12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
AP003478.1-201ENST00000504616 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
AP003478.1-201ENST00000504616 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
AP003478.1-201ENST00000504616 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
AP003478.1-201ENST00000504616 ENTPD3O75355 529 aa12.81□□□□□ -0.36
AP003478.1-201ENST00000504616 INPP5BP32019 993 aa12.81□□□□□ -0.36
AP003478.1-201ENST00000504616 GTF2A2P52657 109 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms