RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 ERICH6Q7L0X2 663 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 TEPSINQ96N21 525 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 MRIQ9BWK5 157 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 USP40Q9NVE5 1235 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
HOXC9-202ENST00000504557 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
HOXC9-202ENST00000504557 CA12O43570 354 aa17.51■□□□□ 0.39
HOXC9-202ENST00000504557 ARID4AP29374 1257 aaPredicted RBP17.51■□□□□ 0.39
HOXC9-202ENST00000504557 MCAMP43121 646 aa17.51■□□□□ 0.39
HOXC9-202ENST00000504557 CCDC158Q5M9N0 1113 aa17.51■□□□□ 0.39
HOXC9-202ENST00000504557 LDLRAD1Q5T700 205 aa17.51■□□□□ 0.39
HOXC9-202ENST00000504557 SPTY2D1Q68D10 685 aaPredicted RBP17.51■□□□□ 0.39
HOXC9-202ENST00000504557 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
HOXC9-202ENST00000504557 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
HOXC9-202ENST00000504557 DOCK2Q92608 1830 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 MECOMQ03112 1051 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
HOXC9-202ENST00000504557 BTDP43251 543 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 NFIAQ12857 509 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 SPRYD7Q5W111 196 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 MIGA2Q7L4E1 593 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 AACSQ86V21 672 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 EAF2Q96CJ1 260 aaPredicted RBP17.49■□□□□ 0.39
HOXC9-202ENST00000504557 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
HOXC9-202ENST00000504557 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
HOXC9-202ENST00000504557 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
HOXC9-202ENST00000504557 MAST2Q6P0Q8 1798 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 HMMRO75330 724 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 PICALMQ13492 652 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 ERC1Q8IUD2 1116 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 WNK4Q96J92 1243 aa17.48■□□□□ 0.39
HOXC9-202ENST00000504557 PDE3AQ14432 1141 aa17.47■□□□□ 0.39
HOXC9-202ENST00000504557 FAM83AQ86UY5 434 aa17.47■□□□□ 0.39
HOXC9-202ENST00000504557 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
HOXC9-202ENST00000504557 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
HOXC9-202ENST00000504557 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
HOXC9-202ENST00000504557 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
HOXC9-202ENST00000504557 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
HOXC9-202ENST00000504557 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
HOXC9-202ENST00000504557 TBC1D8O95759 1140 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 ZAP70P43403 619 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 RGS3P49796 1198 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 VGLL4Q14135 290 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 ZFPM1Q8IX07 1006 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 FAM151AQ8WW52 585 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 OPTNQ96CV9 577 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 CSADQ9Y600 493 aa17.46■□□□□ 0.39
HOXC9-202ENST00000504557 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.38
HOXC9-202ENST00000504557 GAKO14976 1311 aa17.46■□□□□ 0.38
HOXC9-202ENST00000504557 GJA5P36382 358 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 GSTO1P78417 241 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
HOXC9-202ENST00000504557 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
HOXC9-202ENST00000504557 ZNF384Q8TF68 577 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
HOXC9-202ENST00000504557 NSUN4Q96CB9 384 aaKnown RBP17.45■□□□□ 0.38
HOXC9-202ENST00000504557 SAGE1Q9NXZ1 904 aa17.45■□□□□ 0.38
HOXC9-202ENST00000504557 CYP2E1P05181 493 aaPredicted RBP17.44■□□□□ 0.38
HOXC9-202ENST00000504557 LDHCP07864 332 aa17.44■□□□□ 0.38
HOXC9-202ENST00000504557 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
HOXC9-202ENST00000504557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
HOXC9-202ENST00000504557 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
HOXC9-202ENST00000504557 OTUD5Q96G74 571 aa17.44■□□□□ 0.38
HOXC9-202ENST00000504557 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
HOXC9-202ENST00000504557 LAMB1P07942 1786 aa17.43■□□□□ 0.38
HOXC9-202ENST00000504557 MANSC4A6NHS7 340 aaPredicted RBP17.43■□□□□ 0.38
HOXC9-202ENST00000504557 ZBTB48P10074 688 aaPredicted RBP17.43■□□□□ 0.38
HOXC9-202ENST00000504557 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
HOXC9-202ENST00000504557 ZNF341Q9BYN7 854 aa17.43■□□□□ 0.38
HOXC9-202ENST00000504557 DDX4Q9NQI0 724 aaKnown RBP17.43■□□□□ 0.38
HOXC9-202ENST00000504557 PIH1D3Q9NQM4 214 aaKnown RBP17.43■□□□□ 0.38
HOXC9-202ENST00000504557 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
HOXC9-202ENST00000504557 ZBTB22O15209 634 aa17.42■□□□□ 0.38
HOXC9-202ENST00000504557 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
HOXC9-202ENST00000504557 IFIT2P09913 472 aaKnown RBP17.42■□□□□ 0.38
HOXC9-202ENST00000504557 TM4SF4P48230 202 aa17.42■□□□□ 0.38
HOXC9-202ENST00000504557 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
HOXC9-202ENST00000504557 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
HOXC9-202ENST00000504557 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
HOXC9-202ENST00000504557 WDHD1O75717 1129 aaPredicted RBP17.41■□□□□ 0.38
HOXC9-202ENST00000504557 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
HOXC9-202ENST00000504557 INPP5BP32019 993 aa17.41■□□□□ 0.38
HOXC9-202ENST00000504557 DGKZQ13574 1117 aa17.41■□□□□ 0.38
HOXC9-202ENST00000504557 FAM163AQ96GL9 167 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms