RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 KLHDC4Q8TBB5 520 aa11.16□□□□□ -0.62
NR1I3-218ENST00000503547 ARHGAP39Q9C0H5 1083 aa11.16□□□□□ -0.62
NR1I3-218ENST00000503547 UTYO14607 1347 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 DOCK3Q8IZD9 2030 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 TCP10Q12799 353 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 PPIL2Q13356 520 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-218ENST00000503547 MIGA2Q7L4E1 593 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 ZNF341Q9BYN7 854 aa11.15□□□□□ -0.62
NR1I3-218ENST00000503547 ZCCHC17Q9NP64 241 aaKnown RBP11.15□□□□□ -0.62
NR1I3-218ENST00000503547 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-218ENST00000503547 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
NR1I3-218ENST00000503547 DOCK1Q14185 1865 aa11.15□□□□□ -0.63
NR1I3-218ENST00000503547 GNRH1P01148 92 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 SLC5A1P13866 664 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 FKBP1CQ5VVH2 108 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 APOBEC3HQ6NTF7 200 aaKnown RBP11.14□□□□□ -0.63
NR1I3-218ENST00000503547 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-218ENST00000503547 CPA4Q9UI42 421 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
NR1I3-218ENST00000503547 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-218ENST00000503547 INPP5BP32019 993 aa11.13□□□□□ -0.63
NR1I3-218ENST00000503547 PPATQ06203 517 aa11.13□□□□□ -0.63
NR1I3-218ENST00000503547 HHIPL2Q6UWX4 724 aa11.13□□□□□ -0.63
NR1I3-218ENST00000503547 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
NR1I3-218ENST00000503547 RAET1EQ8TD07 263 aa11.13□□□□□ -0.63
NR1I3-218ENST00000503547 PTPRCP08575 1304 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 KIF16BQ96L93 1317 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 H0YGN5 161 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 PDHXO00330 501 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 HOXD10P28358 340 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 PSMC4P43686 418 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 FXR1P51114 621 aaKnown RBP eCLIP11.12□□□□□ -0.63
NR1I3-218ENST00000503547 PRMT2P55345 433 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 MRPL50Q8N5N7 158 aaKnown RBP11.12□□□□□ -0.63
NR1I3-218ENST00000503547 FAM151AQ8WW52 585 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 MRIQ9BWK5 157 aa11.12□□□□□ -0.63
NR1I3-218ENST00000503547 BIN2Q9UBW5 565 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-218ENST00000503547 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-218ENST00000503547 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 RANBP2P49792 3224 aaKnown RBP11.11□□□□□ -0.63
NR1I3-218ENST00000503547 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 EYA2O00167 538 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 LDHBP07195 334 aaKnown RBP11.11□□□□□ -0.63
NR1I3-218ENST00000503547 FGFR2P21802 821 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 ANKRD23Q86SG2 305 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 LPIN2Q92539 896 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 DPF3Q92784 378 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 PARK7Q99497 189 aaKnown RBP11.11□□□□□ -0.63
NR1I3-218ENST00000503547 SIL1Q9H173 461 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
NR1I3-218ENST00000503547 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 DAGLAQ9Y4D2 1042 aa11.11□□□□□ -0.63
NR1I3-218ENST00000503547 OSBPP22059 807 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 PRDX5P30044 214 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 GRK4P32298 578 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 NFIAQ12857 509 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 MTFR1Q15390 333 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 CDC42EP5Q6NZY7 148 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 USP44Q9H0E7 712 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
NR1I3-218ENST00000503547 CTGFP29279 349 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 FCGRTP55899 365 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 ATP2B3Q16720 1220 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-218ENST00000503547 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 SSH1Q8WYL5 1049 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
NR1I3-218ENST00000503547 ALPK3Q96L96 1907 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 UBTFL1P0CB47 393 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-218ENST00000503547 CYP2C8P10632 490 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 CCL5P13501 91 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 UBXN2AP68543 259 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 NOL9Q5SY16 702 aaKnown RBP11.08□□□□□ -0.64
NR1I3-218ENST00000503547 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
NR1I3-218ENST00000503547 SHISA4Q96DD7 197 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 RNF208Q9H0X6 261 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 CEP126Q9P2H0 1117 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
NR1I3-218ENST00000503547 E9PSI1 815 aa11.07□□□□□ -0.64
NR1I3-218ENST00000503547 PHKA1P46020 1223 aa11.07□□□□□ -0.64
NR1I3-218ENST00000503547 RFX5P48382 616 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-218ENST00000503547 RGS3P49796 1198 aa11.07□□□□□ -0.64
NR1I3-218ENST00000503547 PRKCZQ05513 592 aa11.07□□□□□ -0.64
NR1I3-218ENST00000503547 FASTKD5Q7L8L6 764 aaKnown RBP11.07□□□□□ -0.64
NR1I3-218ENST00000503547 ATG9AQ7Z3C6 839 aa11.07□□□□□ -0.64
NR1I3-218ENST00000503547 ZGPATQ8N5A5 531 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms