RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 BOLA2Q9H3K6 86 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 PIH1D3Q9NQM4 214 aaKnown RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 USP40Q9NVE5 1235 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 MROH7-TTC4A0A0A0MT08 1334 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 GAKO14976 1311 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 ATP5JP18859 108 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 BTDP43251 543 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 FKBP1BP68106 108 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 TCP10Q12799 353 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 PRKG1Q13976 671 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 TTF1Q15361 905 aaPredicted RBP8.89□□□□□ -0.99
USP46-203ENST00000502443 SUPT20HL1Q3ZLR7 823 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 NBPF12Q5TAG4 269 aaPredicted RBP8.89□□□□□ -0.99
USP46-203ENST00000502443 ANKRD45Q5TZF3 282 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 FKBP1CQ5VVH2 108 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 MOB2Q70IA6 237 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP46-203ENST00000502443 GPATCH3Q96I76 525 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 NOL10Q9BSC4 688 aaKnown RBP8.89□□□□□ -0.99
USP46-203ENST00000502443 TMEM39BQ9GZU3 492 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 ECHDC1Q9NTX5 307 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 AK9Q5TCS8 1911 aa8.89□□□□□ -0.99
USP46-203ENST00000502443 GPR75-ASB3A0A0A6YYF3 556 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 GOLIM4O00461 696 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 IGHDP01880 384 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 ECE1P42892 770 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 VEGFBP49765 207 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 MAP3K12Q12852 859 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 NFIAQ12857 509 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 CYP4F22Q6NT55 531 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 FAM83AQ86UY5 434 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 MAGEB6Q8N7X4 407 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 HHIPL1Q96JK4 782 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 CAPNS2Q96L46 248 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 HAUS7Q99871 368 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 ANGEL1Q9UNK9 670 aaKnown RBP8.88□□□□□ -0.99
USP46-203ENST00000502443 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 PAPPA2Q9BXP8 1791 aa8.88□□□□□ -0.99
USP46-203ENST00000502443 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
USP46-203ENST00000502443 MAST2Q6P0Q8 1798 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
USP46-203ENST00000502443 IGSF3O75054 1194 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 BAG3O95817 575 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 CYP7A1P22680 504 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 ZNF157P51786 506 aaPredicted RBP8.87□□□□□ -0.99
USP46-203ENST00000502443 TSHZ3Q63HK5 1081 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 B4GALNT3Q6L9W6 998 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 RGMBQ6NW40 437 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 ARMC9Q7Z3E5 817 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 ADGRA1Q86SQ6 560 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 SMC5Q8IY18 1101 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 OTUD7AQ8TE49 926 aaPredicted RBP8.87□□□□□ -0.99
USP46-203ENST00000502443 FAM151AQ8WW52 585 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 EDC3Q96F86 508 aaKnown RBP8.87□□□□□ -0.99
USP46-203ENST00000502443 TEPSINQ96N21 525 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 AATFQ9NY61 560 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP46-203ENST00000502443 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 DOCK2Q92608 1830 aa8.87□□□□□ -0.99
USP46-203ENST00000502443 TTC41PQ6P2S7 1318 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
USP46-203ENST00000502443 PLCG2P16885 1265 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 MX1P20591 662 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 RGS3P49796 1198 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 RHBDL3P58872 404 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 PICALMQ13492 652 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 SLC9C2Q5TAH2 1124 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
USP46-203ENST00000502443 JMYQ8N9B5 988 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 SH3RF3Q8TEJ3 882 aaPredicted RBP8.86□□□□□ -0.99
USP46-203ENST00000502443 CCDC102AQ96A19 550 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 IDI2Q9BXS1 227 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 LNPKQ9C0E8 428 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
USP46-203ENST00000502443 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
USP46-203ENST00000502443 ERC2O15083 957 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 ENTPD3O75355 529 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 PDE6AP16499 860 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 PPP4CP60510 307 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 TMED8Q6PL24 325 aaPredicted RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 MIGA2Q7L4E1 593 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 CHD1LQ86WJ1 897 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 ZFPM1Q8IX07 1006 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 TEX11Q8IYF3 940 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 MIGA1Q8NAN2 632 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 HOOK2Q96ED9 719 aa8.85□□□□□ -0.99
USP46-203ENST00000502443 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP46-203ENST00000502443 DDX4Q9NQI0 724 aaKnown RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 RPAP1Q9BWH6 1393 aaPredicted RBP8.85□□□□□ -0.99
USP46-203ENST00000502443 ZNF532Q9HCE3 1301 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 FAM155AB1AL88 458 aaPredicted RBP8.84□□□□□ -0.99
USP46-203ENST00000502443 AOC2O75106 756 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 GLRX3O76003 335 aaKnown RBP8.84□□□□□ -0.99
USP46-203ENST00000502443 DYNLL1P63167 89 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms