RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 TTF2Q9UNY4 1162 aaKnown RBP8.43□□□□□ -1.06
GPATCH4-209ENST00000498641 LIMCH1Q9UPQ0 1083 aa8.43□□□□□ -1.06
GPATCH4-209ENST00000498641 BCS1LQ9Y276 419 aa8.43□□□□□ -1.06
GPATCH4-209ENST00000498641 SUGT1Q9Y2Z0 365 aa8.43□□□□□ -1.06
GPATCH4-209ENST00000498641 MROH7-TTC4A0A0A0MT08 1334 aa8.43□□□□□ -1.06
GPATCH4-209ENST00000498641 MINDY4BA8MYZ0 360 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 PLCG2P16885 1265 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 BTDP43251 543 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 USP5P45974 858 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 CTDSPL2Q05D32 466 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 STRIP1Q5VSL9 837 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 DHX32Q7L7V1 743 aaKnown RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 CERS3Q8IU89 383 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 NCOA7Q8NI08 942 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 ZSCAN31Q96LW9 406 aaPredicted RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 TCEANC2Q96MN5 208 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 MXD3Q9BW11 206 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 VPS33BQ9H267 617 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 ALDH8A1Q9H2A2 487 aaPredicted RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 KCNQ5Q9NR82 932 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 ATP8A2Q9NTI2 1148 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 ZMYM6O95789 1325 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 DUOX1Q9NRD9 1551 aa8.42□□□□□ -1.06
GPATCH4-209ENST00000498641 SLX4Q8IY92 1834 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 GPR75-ASB3A0A0A6YYF3 556 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 SLC3A2P08195 630 aaKnown RBP8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 MCM5P33992 734 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 SCNN1DP51172 638 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 PPP4CP60510 307 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 PPARAQ07869 468 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 GIMAP6Q6P9H5 292 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 MFSD6Q6ZSS7 791 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 Q6ZUG5 572 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 TBC1D10CQ8IV04 446 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 AMOTL1Q8IY63 956 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 NIM1KQ8IY84 436 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 STK11IPQ8N1F8 1099 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 CERS5Q8N5B7 392 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 RNF41Q9H4P4 317 aaPredicted RBP8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 CNNM2Q9H8M5 875 aa8.41□□□□□ -1.06
GPATCH4-209ENST00000498641 LTBP1Q14766 1721 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 USP17L21D6R901 530 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 PRC1O43663 620 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 IARSP41252 1262 aaKnown RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 RBM5P52756 815 aaKnown RBP eCLIP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 FKBP1AP62942 108 aaKnown RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 EXOSC10Q01780 885 aaKnown RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 RRP12Q5JTH9 1297 aaKnown RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 DACT2Q5SW24 774 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 AKNAD1Q5T1N1 836 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 CTR9Q6PD62 1173 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 HHIPL2Q6UWX4 724 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 CHST3Q7LGC8 479 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 KIAA0825Q8IV33 1275 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 TEX11Q8IYF3 940 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 TGFBRAP1Q8WUH2 860 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 JDP2Q8WYK2 163 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 BRF1Q92994 677 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 TEKT1Q969V4 418 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 KRT23Q9C075 422 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 NBPF3Q9H094 633 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 DCP1AQ9NPI6 582 aaPredicted RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 CHMP5Q9NZZ3 219 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
GPATCH4-209ENST00000498641 DOCK2Q92608 1830 aa8.4□□□□□ -1.07
GPATCH4-209ENST00000498641 GAKO14976 1311 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 YDJCA8MPS7 323 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 B4E1Z4 1266 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 RAD17O75943 681 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 CRKP46108 304 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 CUL4AQ13619 759 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 MAPKAPK5Q8IW41 473 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 MB21D2Q8IYB1 491 aaPredicted RBP8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 NLGN2Q8NFZ4 835 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 INCENPQ9NQS7 918 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 USP40Q9NVE5 1235 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 ARPP21Q9UBL0 812 aaPredicted RBP8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 ANAPC4Q9UJX5 808 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 TPCN1Q9ULQ1 816 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 ZNRF3Q9ULT6 936 aa8.39□□□□□ -1.07
GPATCH4-209ENST00000498641 SNED1Q8TER0 1413 aa8.38□□□□□ -1.07
GPATCH4-209ENST00000498641 NEDD4P46934 1319 aa8.38□□□□□ -1.07
GPATCH4-209ENST00000498641 WDR19Q8NEZ3 1342 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 839.5 ms