RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 MAST3O60307 1309 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 FANCIQ9NVI1 1328 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 FCGRTP55899 365 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 HDLBPQ00341 1268 aaKnown RBP14.73□□□□□ -0.05
CDK9-205ENST00000498339 PRKCZQ05513 592 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 SLC4A10Q6U841 1118 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 ANKRD23Q86SG2 305 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 FAM83AQ86UY5 434 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
CDK9-205ENST00000498339 PARK7Q99497 189 aaKnown RBP14.73□□□□□ -0.05
CDK9-205ENST00000498339 PUS3Q9BZE2 481 aaKnown RBP14.73□□□□□ -0.05
CDK9-205ENST00000498339 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
CDK9-205ENST00000498339 ALPK3Q96L96 1907 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 MROH5Q6ZUA9 1318 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 LAMA3Q16787 3333 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 EVI5O60447 810 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 INPP5BP32019 993 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 METTL24Q5JXM2 366 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 U2AF1L4Q8WU68 220 aaKnown RBP14.72□□□□□ -0.05
CDK9-205ENST00000498339 ZDHHC15Q96MV8 337 aa14.72□□□□□ -0.05
CDK9-205ENST00000498339 ZBTB7BO15156 539 aaPredicted RBP14.71□□□□□ -0.05
CDK9-205ENST00000498339 CCDC27Q2M243 656 aa14.71□□□□□ -0.05
CDK9-205ENST00000498339 UNC93B1Q9H1C4 597 aa14.71□□□□□ -0.05
CDK9-205ENST00000498339 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
CDK9-205ENST00000498339 PTPRFP10586 1907 aa14.7□□□□□ -0.06
CDK9-205ENST00000498339 IL16Q14005 1332 aa14.7□□□□□ -0.06
CDK9-205ENST00000498339 ADGRA2Q96PE1 1338 aa14.7□□□□□ -0.06
CDK9-205ENST00000498339 ZEB1P37275 1124 aaPredicted RBP14.7□□□□□ -0.06
CDK9-205ENST00000498339 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
CDK9-205ENST00000498339 TFRCP02786 760 aaKnown RBP14.69□□□□□ -0.06
CDK9-205ENST00000498339 CYP2C8P10632 490 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 TCP10Q12799 353 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 FKBP1CQ5VVH2 108 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 SUCLG2Q96I99 432 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
CDK9-205ENST00000498339 GABRQQ9UN88 632 aa14.69□□□□□ -0.06
CDK9-205ENST00000498339 DOCK1Q14185 1865 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 A0A1W2PPC1 479 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 ADCY3O60266 1144 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 VAMP4O75379 141 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 BCAMP50895 628 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 EXOSC9Q06265 439 aaKnown RBP14.68□□□□□ -0.06
CDK9-205ENST00000498339 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
CDK9-205ENST00000498339 SRCIN1Q9C0H9 1055 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 KCNH4Q9UQ05 1017 aa14.68□□□□□ -0.06
CDK9-205ENST00000498339 SALL2Q9Y467 1007 aaPredicted RBP14.68□□□□□ -0.06
CDK9-205ENST00000498339 MYH2Q9UKX2 1941 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 DOCK3Q8IZD9 2030 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 SOX1O00570 391 aaPredicted RBP14.67□□□□□ -0.06
CDK9-205ENST00000498339 TNPO2O14787 897 aaKnown RBP14.67□□□□□ -0.06
CDK9-205ENST00000498339 ALDH1L1O75891 902 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 SGPL1O95470 568 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 INHAP05111 366 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 ELNP15502 786 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 LRRC24Q50LG9 513 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 GADL1Q6ZQY3 521 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 FAM151AQ8WW52 585 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 DEFB118Q96PH6 123 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 STAP2Q9UGK3 403 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 SUGT1Q9Y2Z0 365 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 A0A0C4DFX4 3053 aa14.67□□□□□ -0.06
CDK9-205ENST00000498339 IFIT1P09914 478 aaKnown RBP14.66□□□□□ -0.06
CDK9-205ENST00000498339 BCRP11274 1271 aa14.66□□□□□ -0.06
CDK9-205ENST00000498339 FLT3LGP49771 235 aa14.66□□□□□ -0.06
CDK9-205ENST00000498339 HHIPL2Q6UWX4 724 aa14.66□□□□□ -0.06
CDK9-205ENST00000498339 SMCR8Q8TEV9 937 aaPredicted RBP14.66□□□□□ -0.06
CDK9-205ENST00000498339 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
CDK9-205ENST00000498339 PICK1Q9NRD5 415 aa14.66□□□□□ -0.06
CDK9-205ENST00000498339 PHIPQ8WWQ0 1821 aa14.65□□□□□ -0.06
CDK9-205ENST00000498339 PDE8BO95263 885 aa14.65□□□□□ -0.06
CDK9-205ENST00000498339 MOGSQ13724 837 aa14.65□□□□□ -0.06
CDK9-205ENST00000498339 NOL9Q5SY16 702 aaKnown RBP14.65□□□□□ -0.06
CDK9-205ENST00000498339 C7orf61Q8IZ16 206 aa14.65□□□□□ -0.06
CDK9-205ENST00000498339 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
CDK9-205ENST00000498339 DDX60LQ5H9U9 1706 aaKnown RBP14.64□□□□□ -0.07
CDK9-205ENST00000498339 NBPF7P0C2Y1 421 aaPredicted RBP14.64□□□□□ -0.07
CDK9-205ENST00000498339 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
CDK9-205ENST00000498339 GPAT2Q6NUI2 795 aa14.64□□□□□ -0.07
CDK9-205ENST00000498339 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
CDK9-205ENST00000498339 FASTKD5Q7L8L6 764 aaKnown RBP14.64□□□□□ -0.07
CDK9-205ENST00000498339 ZNF112Q9UJU3 913 aa14.64□□□□□ -0.07
CDK9-205ENST00000498339 DAGLAQ9Y4D2 1042 aa14.64□□□□□ -0.07
CDK9-205ENST00000498339 CXCL11O14625 94 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 NFIAQ12857 509 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 DIXDC1Q155Q3 683 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 NECAB2Q7Z6G3 386 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 ZSCAN29Q8IWY8 852 aaPredicted RBP14.63□□□□□ -0.07
CDK9-205ENST00000498339 VGLL2Q8N8G2 317 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 WDR66Q8TBY9 1149 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 KAZALD1Q96I82 304 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 PAWRQ96IZ0 340 aaKnown RBP14.63□□□□□ -0.07
CDK9-205ENST00000498339 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
CDK9-205ENST00000498339 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms