RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 TUBB4AP04350 444 aa22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 TBC1D10CQ8IV04 446 aa22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 PIH1D3Q9NQM4 214 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 ANGEL1Q9UNK9 670 aaKnown RBP22.82■■□□□ 1.24
NKX2-1-202ENST00000498187 ANKRD18BA2A2Z9 1011 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 IGSF3O75054 1194 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 ZNF202O95125 648 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 CTSWP56202 376 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 CYB5R4Q7L1T6 521 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 ZMYM6O95789 1325 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 ATRNO75882 1429 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 MYH3P11055 1940 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 IDH1O75874 414 aaKnown RBP22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 APPP05067 770 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 KCNJ6P48051 423 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 TTF1Q15361 905 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 AXDND1Q5T1B0 1012 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 AIFM3Q96NN9 605 aa22.81■■□□□ 1.24
NKX2-1-202ENST00000498187 PSDA5PKW4 1024 aaPredicted RBP22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 SLC3A2P08195 630 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 METAP2P50579 478 aaKnown RBP eCLIP22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 VGLL2Q8N8G2 317 aa22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 ZNF512BQ96KM6 892 aaPredicted RBP22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 SMC2O95347 1197 aa22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 TAF3Q5VWG9 929 aa22.8■■□□□ 1.24
NKX2-1-202ENST00000498187 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 BIN1O00499 593 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 SH2B2O14492 632 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 PFKFB1P16118 471 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 RXRAP19793 462 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 SFPQP23246 707 aaKnown RBP eCLIP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 ELF2Q15723 593 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 ALG1Q9BT22 464 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 XPO4Q9C0E2 1151 aaKnown RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 V9GYY5 206 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 MROH7-TTC4A0A0A0MT08 1334 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 ZNF532Q9HCE3 1301 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 CMA1P23946 247 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 UBE3CQ15386 1083 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 E4F1Q66K89 784 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 FBXO38Q6PIJ6 1188 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 BCL11BQ9C0K0 894 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 L2HGDHQ9H9P8 463 aa22.79■■□□□ 1.24
NKX2-1-202ENST00000498187 IRS4O14654 1257 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 WDHD1O75717 1129 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 MARCKSP29966 332 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 TMC6Q7Z403 805 aa22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 IFNKQ9P0W0 207 aa22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
NKX2-1-202ENST00000498187 SLFN14P0C7P3 912 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 NLRP12P59046 1061 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 SLC39A14Q15043 492 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 FAM53CQ9NYF3 392 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 B4E1Z4 1266 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 CDKL5O76039 1030 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 PDE8BO95263 885 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 PDE6AP16499 860 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 PHKA1P46020 1223 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 CCDC102BQ68D86 513 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 APOA5Q6Q788 366 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 VPS37DQ86XT2 251 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 RGS22Q8NE09 1264 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 PPP1R13BQ96KQ4 1090 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 SENP2Q9HC62 589 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 ITGB4P16144 1822 aa22.77■■□□□ 1.24
NKX2-1-202ENST00000498187 CDC27P30260 824 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 KRT40Q6A162 431 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 TRMT112Q9UI30 125 aaKnown RBP22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 WWC3Q9ULE0 1092 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 ECM29Q5VYK3 1845 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 ARMCX5Q6P1M9 558 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 MICU3Q86XE3 530 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 PHKBQ93100 1093 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 TBC1D2BQ9UPU7 963 aa22.76■■□□□ 1.23
NKX2-1-202ENST00000498187 CCP110O43303 1012 aa22.75■■□□□ 1.23
NKX2-1-202ENST00000498187 TERF2Q15554 542 aa22.75■■□□□ 1.23
NKX2-1-202ENST00000498187 ARID4AP29374 1257 aaPredicted RBP22.75■■□□□ 1.23
NKX2-1-202ENST00000498187 CPLX2Q6PUV4 134 aaKnown RBP22.75■■□□□ 1.23
NKX2-1-202ENST00000498187 LRP6O75581 1613 aa22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 TCRBV5S4A2TA0A5A2 114 aa22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 TMEM87BQ96K49 555 aa22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 GNL2Q13823 731 aaKnown RBP22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 AIDAQ96BJ3 306 aa22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 STRBPQ96SI9 672 aaKnown RBP22.74■■□□□ 1.23
NKX2-1-202ENST00000498187 IKBKBO14920 756 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 ZBTB43O43298 467 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 PDE8AO60658 829 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 UQCRFS1P1P0C7P4 283 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 CYP19A1P11511 503 aaPredicted RBP22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 SYKP43405 635 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 NCAPHQ15003 741 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 CCDC93Q567U6 631 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 SYT10Q6XYQ8 523 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 NFXL1Q6ZNB6 911 aa22.73■■□□□ 1.23
NKX2-1-202ENST00000498187 IGDCC4Q8TDY8 1250 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms