RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 WDHD1O75717 1129 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-218ENST00000497977 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-218ENST00000497977 MECOMQ03112 1051 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 LRRFIP1Q32MZ4 808 aaKnown RBP12.65□□□□□ -0.38
PTPRN-218ENST00000497977 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPRN-218ENST00000497977 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
PTPRN-218ENST00000497977 DCTPP1Q9H773 170 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 IL1RAPL2Q9NP60 686 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 CSADQ9Y600 493 aa12.65□□□□□ -0.38
PTPRN-218ENST00000497977 GPR75-ASB3A0A0A6YYF3 556 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
PTPRN-218ENST00000497977 MCAMP43121 646 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 SREBF2Q12772 1141 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 PRKG1Q13976 671 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 ZSCAN25Q6NSZ9 544 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 CDC42EP5Q6NZY7 148 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
PTPRN-218ENST00000497977 GCC1Q96CN9 775 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 IDI2Q9BXS1 227 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPRN-218ENST00000497977 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 DBNLQ9UJU6 430 aaKnown RBP12.64□□□□□ -0.39
PTPRN-218ENST00000497977 DAGLAQ9Y4D2 1042 aa12.64□□□□□ -0.39
PTPRN-218ENST00000497977 ALDH1A1P00352 501 aa12.63□□□□□ -0.39
PTPRN-218ENST00000497977 HSPA1AP0DMV8 641 aaKnown RBP12.63□□□□□ -0.39
PTPRN-218ENST00000497977 HSPA1BP0DMV9 641 aaKnown RBP12.63□□□□□ -0.39
PTPRN-218ENST00000497977 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
PTPRN-218ENST00000497977 LDLRAD1Q5T700 205 aa12.63□□□□□ -0.39
PTPRN-218ENST00000497977 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
PTPRN-218ENST00000497977 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
PTPRN-218ENST00000497977 NSUN4Q96CB9 384 aaKnown RBP12.63□□□□□ -0.39
PTPRN-218ENST00000497977 SNRKQ9NRH2 765 aa12.63□□□□□ -0.39
PTPRN-218ENST00000497977 SCAF8Q9UPN6 1271 aaKnown RBP12.63□□□□□ -0.39
PTPRN-218ENST00000497977 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 SLC10A3P09131 477 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
PTPRN-218ENST00000497977 ATP5JP18859 108 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 BTDP43251 543 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 ZAP70P43403 619 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
PTPRN-218ENST00000497977 GRIK5Q16478 980 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 ZNF341Q9BYN7 854 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
PTPRN-218ENST00000497977 PCDHAC2Q9Y5I4 1007 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 GAKO14976 1311 aa12.62□□□□□ -0.39
PTPRN-218ENST00000497977 MANSC4A6NHS7 340 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-218ENST00000497977 ERC2O15083 957 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-218ENST00000497977 IDH1O75874 414 aaKnown RBP12.61□□□□□ -0.39
PTPRN-218ENST00000497977 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
PTPRN-218ENST00000497977 PPP4CP60510 307 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 TCP10Q12799 353 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 SAGE1Q9NXZ1 904 aa12.61□□□□□ -0.39
PTPRN-218ENST00000497977 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 AOC2O75106 756 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 CYP7A1P22680 504 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
PTPRN-218ENST00000497977 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.6□□□□□ -0.39
PTPRN-218ENST00000497977 ADAMTSL1Q8N6G6 1762 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 TM4SF4P48230 202 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 CACNB3P54284 484 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-218ENST00000497977 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
PTPRN-218ENST00000497977 TEX11Q8IYF3 940 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 CSRNP1Q96S65 589 aa12.59□□□□□ -0.39
PTPRN-218ENST00000497977 FAM155AB1AL88 458 aaPredicted RBP12.58□□□□□ -0.4
PTPRN-218ENST00000497977 TBC1D12O60347 775 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 USP5P45974 858 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 RGS3P49796 1198 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 GTF2A2P52657 109 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 PICALMQ13492 652 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 RASAL3Q86YV0 1011 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.4
PTPRN-218ENST00000497977 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 PI4KBQ9UBF8 816 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.4
PTPRN-218ENST00000497977 GOLIM4O00461 696 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 PPATQ06203 517 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 MOB2Q70IA6 237 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 MIGA2Q7L4E1 593 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
PTPRN-218ENST00000497977 ERO1BQ86YB8 467 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms