RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
NUP50-219ENST00000497960 ARID4AP29374 1257 aaPredicted RBP18.84■□□□□ 0.61
NUP50-219ENST00000497960 SREBF2Q12772 1141 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 CCDC158Q5M9N0 1113 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 CDC42EP5Q6NZY7 148 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 SPATA5Q8NB90 893 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 CLMNQ96JQ2 1002 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 HMG20BQ9P0W2 317 aa18.84■□□□□ 0.61
NUP50-219ENST00000497960 TTC39AQ5SRH9 613 aa18.83■□□□□ 0.6
NUP50-219ENST00000497960 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
NUP50-219ENST00000497960 USP40Q9NVE5 1235 aa18.83■□□□□ 0.6
NUP50-219ENST00000497960 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.6
NUP50-219ENST00000497960 AKAP11Q9UKA4 1901 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 ZBTB48P10074 688 aaPredicted RBP18.82■□□□□ 0.6
NUP50-219ENST00000497960 TM4SF4P48230 202 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 HSP90AB4PQ58FF6 505 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 WNK4Q96J92 1243 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 DBNDD2Q9BQY9 259 aa18.82■□□□□ 0.6
NUP50-219ENST00000497960 HMMRO75330 724 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 DCAF15Q66K64 600 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 RPAP2Q8IXW5 612 aaPredicted RBP18.81■□□□□ 0.6
NUP50-219ENST00000497960 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 ZBTB40Q9NUA8 1239 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 CSADQ9Y600 493 aa18.81■□□□□ 0.6
NUP50-219ENST00000497960 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
NUP50-219ENST00000497960 GAKO14976 1311 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 MANSC4A6NHS7 340 aaPredicted RBP18.8■□□□□ 0.6
NUP50-219ENST00000497960 MCAMP43121 646 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 INHBEP58166 350 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 GSTO1P78417 241 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 TCP10Q12799 353 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 PI16Q6UXB8 463 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
NUP50-219ENST00000497960 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
NUP50-219ENST00000497960 CASP8AP2Q9UKL3 1982 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 CAPN15O75808 1086 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 LDHCP07864 332 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 MECOMQ03112 1051 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 NFIAQ12857 509 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 TBC1D9Q6ZT07 1266 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.79■□□□□ 0.6
NUP50-219ENST00000497960 ELP3Q9H9T3 547 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 LRP2BPQ9P2M1 347 aa18.79■□□□□ 0.6
NUP50-219ENST00000497960 MROH7-TTC4A0A0A0MT08 1334 aa18.78■□□□□ 0.6
NUP50-219ENST00000497960 BTDP43251 543 aa18.78■□□□□ 0.6
NUP50-219ENST00000497960 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
NUP50-219ENST00000497960 CCDC8Q9H0W5 538 aaPredicted RBP18.78■□□□□ 0.6
NUP50-219ENST00000497960 SNRKQ9NRH2 765 aa18.78■□□□□ 0.6
NUP50-219ENST00000497960 DBNLQ9UJU6 430 aaKnown RBP18.78■□□□□ 0.6
NUP50-219ENST00000497960 MYH2Q9UKX2 1941 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 ALDH1A1P00352 501 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 VGLL4Q14135 290 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 EAF2Q96CJ1 260 aaPredicted RBP18.77■□□□□ 0.6
NUP50-219ENST00000497960 OPTNQ96CV9 577 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 ZNF512BQ96KM6 892 aaPredicted RBP18.77■□□□□ 0.6
NUP50-219ENST00000497960 WRNIP1Q96S55 665 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 ZNF341Q9BYN7 854 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 FAM198AQ9UFP1 575 aa18.77■□□□□ 0.6
NUP50-219ENST00000497960 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 ENTPD3O75355 529 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 TBC1D8O95759 1140 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 RGS3P49796 1198 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 MIGA2Q7L4E1 593 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 AACSQ86V21 672 aa18.76■□□□□ 0.59
NUP50-219ENST00000497960 NSUN4Q96CB9 384 aaKnown RBP18.76■□□□□ 0.59
NUP50-219ENST00000497960 GJA5P36382 358 aa18.75■□□□□ 0.59
NUP50-219ENST00000497960 OTUD7BQ6GQQ9 843 aa18.75■□□□□ 0.59
NUP50-219ENST00000497960 IFNL1Q8IU54 200 aa18.75■□□□□ 0.59
NUP50-219ENST00000497960 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
NUP50-219ENST00000497960 RHPN1Q8TCX5 695 aa18.75■□□□□ 0.59
NUP50-219ENST00000497960 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
NUP50-219ENST00000497960 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
NUP50-219ENST00000497960 DGKZQ13574 1117 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 ZNF384Q8TF68 577 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 NOL10Q9BSC4 688 aaKnown RBP18.74■□□□□ 0.59
NUP50-219ENST00000497960 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
NUP50-219ENST00000497960 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 APBB1O00213 710 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 IGSF3O75054 1194 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
NUP50-219ENST00000497960 ZAP70P43403 619 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
NUP50-219ENST00000497960 ERO1BQ86YB8 467 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 ZFPM1Q8IX07 1006 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
NUP50-219ENST00000497960 ZKSCAN4Q969J2 545 aaPredicted RBP18.73■□□□□ 0.59
NUP50-219ENST00000497960 OTUD5Q96G74 571 aa18.73■□□□□ 0.59
NUP50-219ENST00000497960 ABHD8Q96I13 439 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms