RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 UBXN6Q9BZV1 441 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 SLC6A16Q9GZN6 736 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 GOLPH3LQ9H4A5 285 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 RTEL1Q9NZ71 1219 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 CWC15Q9P013 229 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 DNAI1Q9UI46 699 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 NWD1Q149M9 1564 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 GRM8O00222 908 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 DDX58O95786 925 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 ATP5JP18859 108 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 DNAJB2P25686 324 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 PLA2G4AP47712 749 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 SCRN1Q12765 414 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 FOXC1Q12948 553 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 ARMCX5Q6P1M9 558 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 DHX32Q7L7V1 743 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 FSIP1Q8NA03 581 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 NSUN7Q8NE18 718 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 ZNF274Q96GC6 653 aaPredicted RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 TCEANC2Q96MN5 208 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 USP28Q96RU2 1077 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 XPO4Q9C0E2 1151 aaKnown RBP6.56□□□□□ -1.36
PHC3-217ENST00000497658 PSD3Q9NYI0 1048 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
PHC3-217ENST00000497658 MRC1P22897 1456 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.55□□□□□ -1.36
PHC3-217ENST00000497658 TMEM2Q9UHN6 1383 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 SALL1Q9NSC2 1324 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 AXIN1O15169 862 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 SMC2O95347 1197 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 YEATS4O95619 227 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 CTC1Q2NKJ3 1217 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 MCMDC2Q4G0Z9 681 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 TMC6Q7Z403 805 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 ZNF589Q86UQ0 364 aaPredicted RBP6.55□□□□□ -1.36
PHC3-217ENST00000497658 NGDNQ8NEJ9 315 aaKnown RBP6.55□□□□□ -1.36
PHC3-217ENST00000497658 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 AK7Q96M32 723 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 BOLA2Q9H3K6 86 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 TMX1Q9H3N1 280 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 POLR3EQ9NVU0 708 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 TOR4AQ9NXH8 423 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 IFNKQ9P0W0 207 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 PA2G4Q9UQ80 394 aaKnown RBP6.55□□□□□ -1.36
PHC3-217ENST00000497658 OVOS2A0A0G2JMS6 1433 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 KDM3BQ7LBC6 1761 aa6.55□□□□□ -1.36
PHC3-217ENST00000497658 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 DHX16O60231 1041 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 DTNBO60941 627 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 TADA3O75528 432 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 SLC3A2P08195 630 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 CYP21A2P08686 494 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 NLRP12P59046 1061 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 CEBPZQ03701 1054 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 TEFQ10587 303 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 TRIM65Q6PJ69 517 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 BRAPQ7Z569 592 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 MSL3Q8N5Y2 521 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 CCDC8Q9H0W5 538 aaPredicted RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 PCDHA7Q9UN72 937 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 ADAMTS13Q76LX8 1427 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 PLEKHG1Q9ULL1 1385 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 USP54Q70EL1 1684 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 BTBD11A6QL63 1104 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 NPHP1O15259 732 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 ARHGAP6O43182 974 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 CAPN2P17655 700 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 EVCP57679 992 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 EXOSC10Q01780 885 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 PDE4CQ08493 712 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 RAD51AP2Q09MP3 1159 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 COL9A3Q14050 684 aaPredicted RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 SF3A1Q15459 793 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 AKAP4Q5JQC9 854 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 LINC00301Q8NCQ3 95 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 EXOC4Q96A65 974 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 DSCC1Q9BVC3 393 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 BICC1Q9H694 974 aaKnown RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 TMEM134Q9H6X4 195 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 EFCC1Q9HA90 598 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 ARFGAP3Q9NP61 516 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 ST7Q9NRC1 585 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 NAP1L2Q9ULW6 460 aaPredicted RBP6.54□□□□□ -1.36
PHC3-217ENST00000497658 TAF6LQ9Y6J9 622 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 ANKARQ7Z5J8 1434 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 MYH15Q9Y2K3 1946 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 HEG1Q9ULI3 1381 aa6.54□□□□□ -1.36
PHC3-217ENST00000497658 SH3TC1Q8TE82 1336 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 CFHP08603 1231 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 CMA1P23946 247 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 FANCCQ00597 558 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 NCAPHQ15003 741 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 DPCR1Q3MIW9 517 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 AMOTQ4VCS5 1084 aa6.53□□□□□ -1.36
PHC3-217ENST00000497658 CC2D1AQ6P1N0 951 aaPredicted RBP6.53□□□□□ -1.36
PHC3-217ENST00000497658 CTR9Q6PD62 1173 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms