RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CLCQ05315 142 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 C10orf62Q5T681 223 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-224ENST00000497488 GK5Q6ZS86 529 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 NECAB3Q96P71 396 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-224ENST00000497488 TCF12Q99081 682 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 PLCD4Q9BRC7 762 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 BRMS1Q9HCU9 246 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-224ENST00000497488 RPS6KL1Q9Y6S9 549 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 CCDC163A0A0D9SF12 145 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 NRDCO43847 1150 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 EYA4O95677 639 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 BDNFP23560 247 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 PIN1Q13526 163 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-224ENST00000497488 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 NXNQ6DKJ4 435 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 SLC4A10Q6U841 1118 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 REC114Q7Z4M0 266 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 NLRP13Q86W25 1043 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 TCEAL8Q8IYN2 117 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 ZBTB38Q8NAP3 1195 aaPredicted RBP7.8□□□□□ -1.16
BRCA1-224ENST00000497488 SALL4Q9UJQ4 1053 aa7.8□□□□□ -1.16
BRCA1-224ENST00000497488 DCAF1Q9Y4B6 1507 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 A0A1W2PQH9 124 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 E2F8A0AVK6 867 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 UPK3BL1B0FP48 263 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 UPK3BL2E5RIL1 263 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 EGFRP00533 1210 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 CPEP16870 476 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 CD53P19397 219 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 PTGIRP43119 386 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 KRBA2Q6ZNG9 492 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 NLRP8Q86W28 1048 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 KIF2CQ99661 725 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 TARS2Q9BW92 718 aaKnown RBP7.79□□□□□ -1.16
BRCA1-224ENST00000497488 RTFDC1Q9BY42 306 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-224ENST00000497488 MIR1-1HGQ9H1L0 117 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 CASS4Q9NQ75 786 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.79□□□□□ -1.16
BRCA1-224ENST00000497488 KANSL3Q9P2N6 904 aa7.79□□□□□ -1.16
BRCA1-224ENST00000497488 FBXO9Q9UK97 447 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-224ENST00000497488 CILPO75339 1184 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 PAGE1O75459 146 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 KIF4AO95239 1232 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-224ENST00000497488 EPB42P16452 691 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 MTMR1Q13613 665 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 RAPGEF1Q13905 1077 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 MLC1Q15049 377 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 GNASQ5JWF2 1037 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 FAM102BQ5T8I3 360 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 STRA8Q7Z7C7 330 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-224ENST00000497488 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 CAMKK2Q96RR4 588 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 SMAD5Q99717 465 aaKnown RBP7.78□□□□□ -1.16
BRCA1-224ENST00000497488 RUSC1Q9BVN2 902 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 NCOA5Q9HCD5 579 aaKnown RBP7.78□□□□□ -1.16
BRCA1-224ENST00000497488 SWAP70Q9UH65 585 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 INTUQ9ULD6 942 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 PCDHB5Q9Y5E4 795 aa7.78□□□□□ -1.16
BRCA1-224ENST00000497488 PHLDB1Q86UU1 1377 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 DNAJC25-GNG10A0A024R161 153 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 GOLGA6CA6NDK9 693 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 GOLGA6BA6NDN3 693 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 PPEF1O14829 653 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-224ENST00000497488 PLD2O14939 933 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 GOLGA6DP0CG33 693 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-224ENST00000497488 MORC3Q14149 939 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 FNDC3BQ53EP0 1204 aaKnown RBP7.77□□□□□ -1.17
BRCA1-224ENST00000497488 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
BRCA1-224ENST00000497488 PCGF5Q86SE9 256 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 HOOK2Q96ED9 719 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 GOLGA6AQ9NYA3 693 aa7.77□□□□□ -1.17
BRCA1-224ENST00000497488 UNC13AQ9UPW8 1703 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 KHNYNO15037 678 aaKnown RBP7.76□□□□□ -1.17
BRCA1-224ENST00000497488 RAPGEF3O95398 923 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 LMNB1P20700 586 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 ITPKAP23677 461 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 LMOD3Q0VAK6 560 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 WDR78Q5VTH9 848 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 DDX46Q7L014 1031 aaKnown RBP7.76□□□□□ -1.17
BRCA1-224ENST00000497488 DGKHQ86XP1 1220 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 PASD1Q8IV76 773 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 AMOTL1Q8IY63 956 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
BRCA1-224ENST00000497488 LRRC47Q8N1G4 583 aaKnown RBP7.76□□□□□ -1.17
BRCA1-224ENST00000497488 MAGEB6Q8N7X4 407 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms