RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 SPATA31C1P0DKV0 1188 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 TMPOP42166 694 aaKnown RBP6.2□□□□□ -1.42
CMSS1-209ENST00000497345 PTK7Q13308 1070 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 COL9A3Q14050 684 aaPredicted RBP6.2□□□□□ -1.42
CMSS1-209ENST00000497345 HIF1AQ16665 826 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 NGLY1Q96IV0 654 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 PLEKHF1Q96S99 279 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 ZNF587Q96SQ5 575 aaPredicted RBP6.2□□□□□ -1.42
CMSS1-209ENST00000497345 PNNQ9H307 717 aaKnown RBP6.2□□□□□ -1.42
CMSS1-209ENST00000497345 PRDM6Q9NQX0 595 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 SPATA31A3Q5VYP0 1347 aa6.2□□□□□ -1.42
CMSS1-209ENST00000497345 PNPLA6Q8IY17 1366 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 TRPM3Q9HCF6 1732 aaPredicted RBP6.19□□□□□ -1.42
CMSS1-209ENST00000497345 LTN1O94822 1766 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 TNS3Q68CZ2 1445 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 SMG6Q86US8 1419 aaKnown RBP6.19□□□□□ -1.42
CMSS1-209ENST00000497345 FAM83GA6ND36 823 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 ADH7P40394 386 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 DPYDQ12882 1025 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 DCTN1Q14203 1278 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 CRTC2Q53ET0 693 aaPredicted RBP6.19□□□□□ -1.42
CMSS1-209ENST00000497345 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 BTLAQ7Z6A9 289 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 ANKRD24Q8TF21 1146 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 IP6K1Q92551 441 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 BHMTQ93088 406 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 TSR2Q969E8 191 aaKnown RBP6.19□□□□□ -1.42
CMSS1-209ENST00000497345 VRTNQ9H8Y1 702 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 NLRP2Q9NX02 1062 aa6.19□□□□□ -1.42
CMSS1-209ENST00000497345 LTBP4Q8N2S1 1624 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 PXDNQ92626 1479 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 ALBP02768 609 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 GATA4P43694 442 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 SLFN5Q08AF3 891 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 PDE3BQ13370 1112 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 DOC2BQ14184 412 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 NFE2L2Q16236 605 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 PRRT3Q5FWE3 981 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 NBPF6Q5VWK0 638 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 C20orf204Q6ZNR8 217 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 ARHGEF25Q86VW2 580 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 NBPF4Q96M43 638 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 EFCC1Q9HA90 598 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 PRDM11Q9NQV5 511 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 MED1Q15648 1581 aaPredicted RBP6.18□□□□□ -1.42
CMSS1-209ENST00000497345 INSRP06213 1382 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 KIAA0232Q92628 1395 aa6.18□□□□□ -1.42
CMSS1-209ENST00000497345 ROBO1Q9Y6N7 1651 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 NFAT5O94916 1531 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 PLIN1O60240 522 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 TOM1O60784 492 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 LGR5O75473 907 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 IGFBP4P22692 258 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 LMOD1P29536 600 aaPredicted RBP6.17□□□□□ -1.42
CMSS1-209ENST00000497345 EVA1CP58658 441 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 TRIM28Q13263 835 aaKnown RBP6.17□□□□□ -1.42
CMSS1-209ENST00000497345 RTN1Q16799 776 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 MTHFSDQ2M296 383 aaKnown RBP6.17□□□□□ -1.42
CMSS1-209ENST00000497345 MCM10Q7L590 875 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 ANKMY2Q8IV38 441 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 GSX2Q9BZM3 304 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 USP19O94966 1318 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 ALS2Q96Q42 1657 aa6.17□□□□□ -1.42
CMSS1-209ENST00000497345 IQSEC2Q5JU85 1478 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 RGPD2P0DJD1 1756 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 RGPD5Q99666 1765 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L15C9J2P7 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L10C9JJH3 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L13C9JLJ4 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L12C9JPN9 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L11C9JVI0 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L21D6R901 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L18D6R9N7 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L22D6RA61 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L17D6RBQ6 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L19D6RCP7 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L20D6RJB6 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 E9PSI1 815 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 ELL2O00472 640 aaPredicted RBP6.16□□□□□ -1.42
CMSS1-209ENST00000497345 APBA3O96018 575 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 NID1P14543 1247 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP17L24Q0WX57 530 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 IER5Q5VY09 327 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 IGFLR1Q9H665 355 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 MIS18AQ9NYP9 233 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 USP35Q9P2H5 1018 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
CMSS1-209ENST00000497345 BCS1LQ9Y276 419 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
CMSS1-209ENST00000497345 SLIT3O75094 1523 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 PHRF1Q9P1Y6 1649 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 FAM229AH3BQW9 127 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 TGFBR3LH3BV60 316 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 TCERG1O14776 1098 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 LILRB5O75023 590 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms