RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 BRD3Q15059 726 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 MAP3K11Q16584 847 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 FXNQ16595 210 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 LONRF2Q1L5Z9 754 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SEZ6Q53EL9 994 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SNAP47Q5SQN1 464 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 PERM1Q5SV97 790 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 FAM102BQ5T8I3 360 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 EFCAB2Q5VUJ9 269 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 AGMOQ6ZNB7 445 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 LHFPL2Q6ZUX7 228 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 VASH1Q7L8A9 365 aaPredicted RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 ZNF438Q7Z4V0 828 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 NECAB2Q7Z6G3 386 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 STRA8Q7Z7C7 330 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 DGKHQ86XP1 1220 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 CHPFQ8IZ52 775 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 IFNL3Q8IZI9 196 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 CACTIN-AS1Q8N1I8 211 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 MYO1HQ8N1T3 1032 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 MAGEB6Q8N7X4 407 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 UBR7Q8N806 425 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 RIN3Q8TB24 985 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 E2F7Q96AV8 911 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 CEP63Q96MT8 703 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 CDK15Q96Q40 435 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 ESYT1Q9BSJ8 1104 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 TARS2Q9BW92 718 aaKnown RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 OXCT2Q9BYC2 517 aaPredicted RBP2.47□□□□□ -2.01
UBR4-217ENST00000497018 ELP3Q9H9T3 547 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 IL21Q9HBE4 155 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 PTPRHQ9HD43 1115 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 JADE2Q9NQC1 790 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 LATS2Q9NRM7 1088 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 DZANK1Q9NVP4 752 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 WBP1LQ9NX94 342 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 ZIM2Q9NZV7 527 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 SWAP70Q9UH65 585 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 TAGLN3Q9UI15 199 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 TRAK1Q9UPV9 953 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 MAPRE3Q9UPY8 281 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 LZTS1Q9Y250 596 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 PHLDB1Q86UU1 1377 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 ROBO2Q9HCK4 1378 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 DCAF1Q9Y4B6 1507 aa2.47□□□□□ -2.01
UBR4-217ENST00000497018 PLB1Q6P1J6 1458 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 UHRF1BP1Q6BDS2 1440 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ENC1O14682 589 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ST18O60284 1047 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 GADD45BO75293 160 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 RFPL1O75677 317 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 F13A1P00488 732 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 TRIM27P14373 513 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FSHRP23945 695 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 GTF2E1P29083 439 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 HTR3AP46098 478 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 DGKGP49619 791 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 IDH3AP50213 366 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 GUCY2FP51841 1108 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FCGRTP55899 365 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 RPS26P62854 115 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 PURAQ00577 322 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 RAPGEF1Q13905 1077 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 MPP2Q14168 576 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 SIM2Q14190 667 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 MLC1Q15049 377 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 MAPRE1Q15691 268 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 ZRSR2Q15696 482 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 SLC10A6Q3KNW5 377 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 GRAMD1BQ3KR37 738 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FAM83BQ5T0W9 1011 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FOXB2Q5VYV0 432 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 LARP1BQ659C4 914 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 C6orf15Q6UXA7 325 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 BNC2Q6ZN30 1099 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 CCDC84Q86UT8 332 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 NLRP8Q86W28 1048 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 TRIM42Q8IWZ5 723 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FAM178BQ8IXR5 827 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 FAM9BQ8IZU0 186 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 REXO1Q8N1G1 1221 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 C1orf127Q8N9H9 656 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ATXN2LQ8WWM7 1075 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 KISS1RQ969F8 398 aaPredicted RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 CNKSR1Q969H4 720 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 MARVELD3Q96A59 401 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 CHMP4CQ96CF2 233 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 EXOC2Q96KP1 924 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 CNTNAP3BQ96NU0 1288 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 HS3ST6Q96QI5 342 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 TCF12Q99081 682 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 RHOBTB2Q9BYZ6 727 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 CNTNAP3Q9BZ76 1288 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 TRIM8Q9BZR9 551 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 NCOA5Q9HCD5 579 aaKnown RBP2.46□□□□□ -2.02
UBR4-217ENST00000497018 OSGEPQ9NPF4 335 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ANKIB1Q9P2G1 1089 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ZNF69Q9UC07 566 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 INTUQ9ULD6 942 aa2.46□□□□□ -2.02
UBR4-217ENST00000497018 ZNF232Q9UNY5 417 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms