RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RASAL3Q86YV0 1011 aa19.79■□□□□ 0.76
DNMT3A-215ENST00000496570 NSUN4Q96CB9 384 aaKnown RBP19.79■□□□□ 0.76
DNMT3A-215ENST00000496570 RFX7Q2KHR2 1363 aa19.79■□□□□ 0.76
DNMT3A-215ENST00000496570 ZAP70P43403 619 aa19.78■□□□□ 0.76
DNMT3A-215ENST00000496570 ZNF157P51786 506 aaPredicted RBP19.78■□□□□ 0.76
DNMT3A-215ENST00000496570 SPTY2D1Q68D10 685 aaPredicted RBP19.78■□□□□ 0.76
DNMT3A-215ENST00000496570 ERICH6Q7L0X2 663 aa19.78■□□□□ 0.76
DNMT3A-215ENST00000496570 NFIAQ12857 509 aa19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 FAM83AQ86UY5 434 aa19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 DZIP1Q86YF9 867 aaKnown RBP19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 FAM198AQ9UFP1 575 aa19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 ANGEL1Q9UNK9 670 aaKnown RBP19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 MAST2Q6P0Q8 1798 aa19.77■□□□□ 0.76
DNMT3A-215ENST00000496570 OTOFQ9HC10 1997 aa19.77■□□□□ 0.75
DNMT3A-215ENST00000496570 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 RPAP1Q9BWH6 1393 aaPredicted RBP19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 FOXN1O15353 648 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 USP2O75604 605 aaPredicted RBP19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 NOGQ13253 232 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 TTLL12Q14166 644 aaPredicted RBP19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 SUPT20HL1Q3ZLR7 823 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 DCTPP1Q9H773 170 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 PIH1D3Q9NQM4 214 aaKnown RBP19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 NDUFB9Q9Y6M9 179 aa19.76■□□□□ 0.75
DNMT3A-215ENST00000496570 GPR75-ASB3A0A0A6YYF3 556 aa19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 TNNI2P48788 182 aa19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 RHBDL3P58872 404 aa19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 ARMC9Q7Z3E5 817 aa19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 CLASRPQ8N2M8 674 aaKnown RBP19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 USP40Q9NVE5 1235 aa19.75■□□□□ 0.75
DNMT3A-215ENST00000496570 DOCK2Q92608 1830 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 BTDP43251 543 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 MAP2K1Q02750 393 aaPredicted RBP19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 ZFPM1Q8IX07 1006 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 CLMNQ96JQ2 1002 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 ANTXR1Q9H6X2 564 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
DNMT3A-215ENST00000496570 PPP1R12BO60237 982 aaPredicted RBP19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 SMARCA5O60264 1052 aaPredicted RBP19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 WDHD1O75717 1129 aaPredicted RBP19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 KIF23Q02241 960 aaPredicted RBP19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 ADGRA1Q86SQ6 560 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 SLF2Q8IX21 1173 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 FAM151AQ8WW52 585 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 IDI2Q9BXS1 227 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 DDX4Q9NQI0 724 aaKnown RBP19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 RAI14Q9P0K7 980 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 LRP2BPQ9P2M1 347 aa19.73■□□□□ 0.75
DNMT3A-215ENST00000496570 TCP10Q12799 353 aa19.72■□□□□ 0.75
DNMT3A-215ENST00000496570 LRRCC1Q9C099 1032 aa19.72■□□□□ 0.75
DNMT3A-215ENST00000496570 ATRNL1Q5VV63 1379 aa19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 LAMB1P07942 1786 aa19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 IFIT2P09913 472 aaKnown RBP19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 GSTO1P78417 241 aa19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 SH3BP5LQ7L8J4 393 aa19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
DNMT3A-215ENST00000496570 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
DNMT3A-215ENST00000496570 RGS3P49796 1198 aa19.7■□□□□ 0.74
DNMT3A-215ENST00000496570 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.7■□□□□ 0.74
DNMT3A-215ENST00000496570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.7■□□□□ 0.74
DNMT3A-215ENST00000496570 CSRNP1Q96S65 589 aa19.7■□□□□ 0.74
DNMT3A-215ENST00000496570 IGSF3O75054 1194 aa19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 ENTPD3O75355 529 aa19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 LDHCP07864 332 aa19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 HSPA8P11142 646 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 SPRYD7Q5W111 196 aa19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 NAA16Q6N069 864 aaPredicted RBP19.69■□□□□ 0.74
DNMT3A-215ENST00000496570 GJA5P36382 358 aa19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 ANKRD13AQ8IZ07 590 aa19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 SUPT16HQ9Y5B9 1047 aaKnown RBP19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 CDK5RAP2Q96SN8 1893 aa19.68■□□□□ 0.74
DNMT3A-215ENST00000496570 DDTLA6NHG4 134 aaPredicted RBP19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 ATP5JP18859 108 aa19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 PPP4CP60510 307 aa19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 MKRN3Q13064 507 aaKnown RBP19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 COL13A1Q5TAT6 717 aaPredicted RBP19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 MIGA2Q7L4E1 593 aa19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 EDC3Q96F86 508 aaKnown RBP19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 WNK4Q96J92 1243 aa19.67■□□□□ 0.74
DNMT3A-215ENST00000496570 IDH1O75874 414 aaKnown RBP19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 MAP4K4O95819 1239 aaPredicted RBP19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 SLURP2P0DP57 97 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 CTCFP49711 727 aaPredicted RBP19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 VGLL4Q14135 290 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 EXOC6Q8TAG9 804 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 SH3RF3Q8TEJ3 882 aaPredicted RBP19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 SLC10A4Q96EP9 437 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 AATFQ9NY61 560 aaKnown RBP eCLIP19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 TSKSQ9UJT2 592 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 ZNF112Q9UJU3 913 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 FOCADQ5VW36 1801 aa19.66■□□□□ 0.74
DNMT3A-215ENST00000496570 LBX1P52954 281 aa19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 MAP3K9P80192 1104 aa19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 MAP3K10Q02779 954 aa19.65■□□□□ 0.74
DNMT3A-215ENST00000496570 PICALMQ13492 652 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms