RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
MACF1-223ENST00000496360 ME1P48163 572 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
MACF1-223ENST00000496360 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 CEP112Q8N8E3 955 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
MACF1-223ENST00000496360 LY75O60449 1722 aa17.21■□□□□ 0.35
MACF1-223ENST00000496360 JAK2O60674 1132 aa17.21■□□□□ 0.35
MACF1-223ENST00000496360 NCAPHQ15003 741 aa17.21■□□□□ 0.35
MACF1-223ENST00000496360 MSANTD4Q8NCY6 345 aa17.21■□□□□ 0.35
MACF1-223ENST00000496360 MIS18AQ9NYP9 233 aa17.21■□□□□ 0.35
MACF1-223ENST00000496360 STX10O60499 249 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 PSEN1P49768 467 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 MTHFSDQ2M296 383 aaKnown RBP17.2■□□□□ 0.34
MACF1-223ENST00000496360 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 MMS22LQ6ZRQ5 1243 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 PACS2Q86VP3 889 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 VSTM4Q8IW00 320 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 KCNG4Q8TDN1 519 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 USP28Q96RU2 1077 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 ITGB4P16144 1822 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 SLC3A2P08195 630 aaKnown RBP17.2■□□□□ 0.34
MACF1-223ENST00000496360 GYS2P54840 703 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 EIF5P55010 431 aaKnown RBP17.2■□□□□ 0.34
MACF1-223ENST00000496360 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 VPS18Q9P253 973 aa17.2■□□□□ 0.34
MACF1-223ENST00000496360 A0A087WUV0 522 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 YEATS4O95619 227 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 HOXB7P09629 217 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 GNG11P61952 73 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 STK3Q13188 491 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 HSP90B2PQ58FF3 399 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 BEND6Q5SZJ8 279 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 SRGAP1Q7Z6B7 1085 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 PPFIA4O75335 1185 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 TOP1P11387 765 aaKnown RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 UBASH3AP57075 661 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 SPON1Q9HCB6 807 aa17.19■□□□□ 0.34
MACF1-223ENST00000496360 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
MACF1-223ENST00000496360 USP8P40818 1118 aa17.18■□□□□ 0.34
MACF1-223ENST00000496360 KCNQ4P56696 695 aa17.18■□□□□ 0.34
MACF1-223ENST00000496360 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
MACF1-223ENST00000496360 PIGBQ92521 554 aa17.18■□□□□ 0.34
MACF1-223ENST00000496360 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
MACF1-223ENST00000496360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 FANCGO15287 622 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 GSCP56915 257 aaPredicted RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 SECISBP2LQ93073 1101 aaKnown RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
MACF1-223ENST00000496360 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 FAM227BQ96M60 508 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 DTNBO60941 627 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 MYL5Q02045 173 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 TMEM139Q8IV31 216 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 TACO1Q9BSH4 297 aaKnown RBP17.17■□□□□ 0.34
MACF1-223ENST00000496360 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
MACF1-223ENST00000496360 LOC102724159A0A0B4J2E5 919 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 KIF1CO43896 1103 aaKnown RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 PWP2Q15269 919 aaKnown RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 BEND3Q5T5X7 828 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 DNAJC21Q5F1R6 531 aaKnown RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 Q6ZUG5 572 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 BAG1Q99933 345 aaPredicted RBP17.16■□□□□ 0.34
MACF1-223ENST00000496360 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
MACF1-223ENST00000496360 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 TAF5LO75529 589 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 SERPINC1P01008 464 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 SCRN1Q12765 414 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
MACF1-223ENST00000496360 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
MACF1-223ENST00000496360 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 CUTAO60888 179 aa17.14■□□□□ 0.33
MACF1-223ENST00000496360 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms