RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OS9Q13438 667 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-213ENST00000496347 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
HDAC4-213ENST00000496347 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
HDAC4-213ENST00000496347 SPTY2D1Q68D10 685 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-213ENST00000496347 SLF2Q8IX21 1173 aa19.38■□□□□ 0.69
HDAC4-213ENST00000496347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDAC4-213ENST00000496347 ABHD8Q96I13 439 aa19.38■□□□□ 0.69
HDAC4-213ENST00000496347 NEUROD6Q96NK8 337 aa19.38■□□□□ 0.69
HDAC4-213ENST00000496347 CFHR5Q9BXR6 569 aa19.38■□□□□ 0.69
HDAC4-213ENST00000496347 ALDH1A1P00352 501 aa19.37■□□□□ 0.69
HDAC4-213ENST00000496347 INHBEP58166 350 aa19.37■□□□□ 0.69
HDAC4-213ENST00000496347 CDC42EP5Q6NZY7 148 aa19.37■□□□□ 0.69
HDAC4-213ENST00000496347 PANK1Q8TE04 598 aa19.37■□□□□ 0.69
HDAC4-213ENST00000496347 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
HDAC4-213ENST00000496347 CSADQ9Y600 493 aa19.37■□□□□ 0.69
HDAC4-213ENST00000496347 TNNI3KQ59H18 835 aa19.36■□□□□ 0.69
HDAC4-213ENST00000496347 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
HDAC4-213ENST00000496347 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
HDAC4-213ENST00000496347 ABCF2Q9UG63 623 aa19.36■□□□□ 0.69
HDAC4-213ENST00000496347 FPGT-TNNI3KV9GXZ4 949 aa19.36■□□□□ 0.69
HDAC4-213ENST00000496347 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
HDAC4-213ENST00000496347 UQCRFS1P1P0C7P4 283 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 VGLL4Q14135 290 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 FAM151AQ8WW52 585 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 HMG20BQ9P0W2 317 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
HDAC4-213ENST00000496347 MROH7-TTC4A0A0A0MT08 1334 aa19.34■□□□□ 0.69
HDAC4-213ENST00000496347 MAP3K9P80192 1104 aa19.34■□□□□ 0.69
HDAC4-213ENST00000496347 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-213ENST00000496347 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
HDAC4-213ENST00000496347 OPTNQ96CV9 577 aa19.34■□□□□ 0.69
HDAC4-213ENST00000496347 FAM163AQ96GL9 167 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-213ENST00000496347 HTTP42858 3142 aa19.34■□□□□ 0.69
HDAC4-213ENST00000496347 GJA5P36382 358 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 MCAMP43121 646 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 NFIAQ12857 509 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 DGKZQ13574 1117 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 IFNL1Q8IU54 200 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 WRNIP1Q96S55 665 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 MCOLN1Q9GZU1 580 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 ELP3Q9H9T3 547 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.68
HDAC4-213ENST00000496347 GSTO1P78417 241 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 PI16Q6UXB8 463 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 ERC1Q8IUD2 1116 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 IDI2Q9BXS1 227 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 ZNF341Q9BYN7 854 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
HDAC4-213ENST00000496347 USP40Q9NVE5 1235 aa19.32■□□□□ 0.68
HDAC4-213ENST00000496347 COL2A1P02458 1487 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-213ENST00000496347 FOCADQ5VW36 1801 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 SPDYE5A6NIY4 337 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 MECOMQ03112 1051 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 OTUD7BQ6GQQ9 843 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 CTU1Q7Z7A3 348 aaKnown RBP19.31■□□□□ 0.68
HDAC4-213ENST00000496347 ZNF512BQ96KM6 892 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-213ENST00000496347 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 SNCAIPQ9Y6H5 919 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
HDAC4-213ENST00000496347 TESPA1A2RU30 521 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 IGF2BP3O00425 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 IGSF3O75054 1194 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 ENTPD3O75355 529 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 TBC1D8O95759 1140 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 BTDP43251 543 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 TCP10Q12799 353 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 TTC39AQ5SRH9 613 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 ZNF296Q8WUU4 475 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 DBNDD2Q9BQY9 259 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 DOCK1Q14185 1865 aa19.3■□□□□ 0.68
HDAC4-213ENST00000496347 MYO5AQ9Y4I1 1855 aaKnown RBP19.3■□□□□ 0.68
HDAC4-213ENST00000496347 CDK5RAP2Q96SN8 1893 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 GPR75-ASB3A0A0A6YYF3 556 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 GPR25O00155 361 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 RGS3P49796 1198 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 GTF2A2P52657 109 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 HSP90AB4PQ58FF6 505 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 ERO1BQ86YB8 467 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 NSUN4Q96CB9 384 aaKnown RBP19.29■□□□□ 0.68
HDAC4-213ENST00000496347 OTUD5Q96G74 571 aa19.29■□□□□ 0.68
HDAC4-213ENST00000496347 DBNLQ9UJU6 430 aaKnown RBP19.29■□□□□ 0.68
HDAC4-213ENST00000496347 HMMRO75330 724 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
HDAC4-213ENST00000496347 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
HDAC4-213ENST00000496347 LDHCP07864 332 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 ZNF384Q8TF68 577 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 MS4A4AQ96JQ5 239 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 ZBTB40Q9NUA8 1239 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
HDAC4-213ENST00000496347 PPIL2Q13356 520 aa19.27■□□□□ 0.68
HDAC4-213ENST00000496347 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
HDAC4-213ENST00000496347 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
HDAC4-213ENST00000496347 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-213ENST00000496347 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
HDAC4-213ENST00000496347 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms