RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
SSR3-208ENST00000496050 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
SSR3-208ENST00000496050 HGSNATQ68CP4 663 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 PDZD3Q86UT5 571 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
SSR3-208ENST00000496050 KLHDC7BQ96G42 594 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 LRRC3Q9BY71 257 aa8.32□□□□□ -1.08
SSR3-208ENST00000496050 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 TLR3O15455 904 aaKnown RBP8.31□□□□□ -1.08
SSR3-208ENST00000496050 MCM4P33991 863 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 ZNF165P49910 485 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 SEPT6Q14141 434 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 LYPD4Q6UWN0 246 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 ENAMQ9NRM1 1142 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
SSR3-208ENST00000496050 MAOBP27338 520 aa8.3□□□□□ -1.08
SSR3-208ENST00000496050 CRKP46108 304 aa8.3□□□□□ -1.08
SSR3-208ENST00000496050 SETDB1Q15047 1291 aa8.3□□□□□ -1.08
SSR3-208ENST00000496050 HP1BP3Q5SSJ5 553 aaPredicted RBP8.3□□□□□ -1.08
SSR3-208ENST00000496050 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
SSR3-208ENST00000496050 DPH6Q7L8W6 267 aa8.3□□□□□ -1.08
SSR3-208ENST00000496050 ZC3H12CQ9C0D7 883 aaKnown RBP8.3□□□□□ -1.08
SSR3-208ENST00000496050 WFS1O76024 890 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 GMPRP36959 345 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 RPL6Q02878 288 aaKnown RBP8.29□□□□□ -1.08
SSR3-208ENST00000496050 CKAP2LQ8IYA6 745 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 REXO1Q8N1G1 1221 aaKnown RBP8.29□□□□□ -1.08
SSR3-208ENST00000496050 DTWD1Q8N5C7 304 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 FBXO27Q8NI29 283 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 CRBNQ96SW2 442 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 CARD10Q9BWT7 1032 aa8.29□□□□□ -1.08
SSR3-208ENST00000496050 NID1P14543 1247 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
SSR3-208ENST00000496050 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
SSR3-208ENST00000496050 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 ILDR2Q71H61 639 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 SRRTQ9BXP5 876 aaKnown RBP8.28□□□□□ -1.08
SSR3-208ENST00000496050 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 CACNA2D2Q9NY47 1150 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 PCDHA4Q9UN74 947 aa8.28□□□□□ -1.08
SSR3-208ENST00000496050 SLFN14P0C7P3 912 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 PDE3AQ14432 1141 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 PMFBP1Q8TBY8 1022 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 FERD3LQ96RJ6 166 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 BRMS1Q9HCU9 246 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 SNCAIPQ9Y6H5 919 aa8.27□□□□□ -1.09
SSR3-208ENST00000496050 IMPDH2P12268 514 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
SSR3-208ENST00000496050 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 FBXW10Q5XX13 1052 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 HDXQ7Z353 690 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 GALNT11Q8NCW6 608 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 NRSN2Q9GZP1 204 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 CCDC86Q9H6F5 360 aaKnown RBP8.26□□□□□ -1.09
SSR3-208ENST00000496050 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
SSR3-208ENST00000496050 ETFBP38117 255 aa8.25□□□□□ -1.09
SSR3-208ENST00000496050 EIF6P56537 245 aaKnown RBP8.25□□□□□ -1.09
SSR3-208ENST00000496050 NLRP12P59046 1061 aa8.25□□□□□ -1.09
SSR3-208ENST00000496050 RAC1P63000 192 aa8.25□□□□□ -1.09
SSR3-208ENST00000496050 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
SSR3-208ENST00000496050 EHMT1Q9H9B1 1298 aa8.25□□□□□ -1.09
SSR3-208ENST00000496050 R3HCC1Q9Y3T6 440 aaKnown RBP8.25□□□□□ -1.09
SSR3-208ENST00000496050 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 PIK3R2O00459 728 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 ATE1O95260 518 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 ECEL1O95672 775 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 LIG1P18858 919 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 DGKGP49619 791 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 CCDC144BQ3MJ40 725 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
SSR3-208ENST00000496050 GK5Q6ZS86 529 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 NOP9Q86U38 636 aaKnown RBP8.24□□□□□ -1.09
SSR3-208ENST00000496050 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 RAD18Q9NS91 495 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 PPT2Q9UMR5 302 aa8.24□□□□□ -1.09
SSR3-208ENST00000496050 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 GFRA2O00451 464 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 TM4SF5O14894 197 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 DDX3YO15523 660 aaKnown RBP8.23□□□□□ -1.09
SSR3-208ENST00000496050 DEAF1O75398 565 aaPredicted RBP8.23□□□□□ -1.09
SSR3-208ENST00000496050 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 LRRFIP1Q32MZ4 808 aaKnown RBP8.23□□□□□ -1.09
SSR3-208ENST00000496050 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.23□□□□□ -1.09
SSR3-208ENST00000496050 ANKS3Q6ZW76 656 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 OR6P1Q8NGX9 317 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 ELMO3Q96BJ8 720 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 PRKAG3Q9UGI9 489 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 PCDHB14Q9Y5E9 798 aa8.23□□□□□ -1.09
SSR3-208ENST00000496050 TACC3Q9Y6A5 838 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms