RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 ANTXR2P58335 489 aa10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 ARID5BQ14865 1188 aa10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 CCAR1Q8IX12 1150 aaKnown RBP10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 ANKRD7Q92527 254 aa10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
TM9SF4-207ENST00000495749 TDO2P48775 406 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 EVX2Q03828 476 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NBPF5PQ86XG9 351 aaPredicted RBP10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 LCORLQ8N3X6 602 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NAPBQ9H115 298 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NCBP1Q09161 790 aaKnown RBP10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 CTNNA3Q9UI47 895 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 ABCA3Q99758 1704 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 BECN2A8MW95 431 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 PFKFB2O60825 505 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 CYP7A1P22680 504 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 IQCB1Q15051 598 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 SLC4A4Q9Y6R1 1079 aa10.58□□□□□ -0.72
TM9SF4-207ENST00000495749 PARP4Q9UKK3 1724 aaKnown RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 SMTNL1A8MU46 457 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 ZPR1O75312 459 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 ZFYP08048 801 aaPredicted RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 DMTNQ08495 405 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 ANKRD18AQ8IVF6 992 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 USP28Q96RU2 1077 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 ORC3Q9UBD5 711 aaPredicted RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 HMGB1P09429 215 aaKnown RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 FDPSP14324 419 aaKnown RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 ME1P48163 572 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 DYNLL1P63167 89 aaKnown RBP10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 CCDC73Q6ZRK6 1079 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 SMARCC2Q8TAQ2 1214 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 NUP133Q8WUM0 1156 aa10.57□□□□□ -0.72
TM9SF4-207ENST00000495749 KINO60870 393 aaKnown RBP10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 CAVIN2O95810 425 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 STX1AQ16623 288 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 LRRC8AQ8IWT6 810 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 STRBPQ96SI9 672 aaKnown RBP10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 SETDB2Q96T68 719 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 RCOR1Q9UKL0 485 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 NEDD4P46934 1319 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 USP27XA6NNY8 438 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 IFNL3Q8IZI9 196 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 EPB41L4AQ9HCS5 686 aaPredicted RBP10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 TACC3Q9Y6A5 838 aa10.56□□□□□ -0.72
TM9SF4-207ENST00000495749 IGSF3O75054 1194 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 FGFR2P21802 821 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 SNW1Q13573 536 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 ISM2Q6H9L7 571 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 MROH5Q6ZUA9 1318 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 IFIT3O14879 490 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 SKILP12757 684 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 TMEM67Q5HYA8 995 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 CEP135Q66GS9 1140 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 NAA16Q6N069 864 aaPredicted RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 MB21D2Q8IYB1 491 aaPredicted RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 FSIP1Q8NA03 581 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 ARHGEF1Q92888 912 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 C8orf76Q96K31 380 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 TRMT1Q9NXH9 659 aaKnown RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 ZSWIM5Q9P217 1185 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 PAXBP1Q9Y5B6 917 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 CTAGE5O15320 804 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 UQCRFS1P1P0C7P4 283 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 MARCKSP29966 332 aaPredicted RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 FAM196AQ6ZSG2 479 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 SMARCC1Q92922 1105 aaPredicted RBP10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 MRFAP1L1Q96HT8 127 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 MINPP1Q9UNW1 487 aa10.55□□□□□ -0.72
TM9SF4-207ENST00000495749 CDC27P30260 824 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 CDC25BP30305 580 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 GNL2Q13823 731 aaKnown RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 UTP14CQ5TAP6 766 aaKnown RBP10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
TM9SF4-207ENST00000495749 CDC5LQ99459 802 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms